| Visualization and analysis of gene expression in tissue sections by spatial transcriptomics PL Ståhl, F Salmén, S Vickovic, A Lundmark, JF Navarro, J Magnusson, ... Science 353 (6294), 78-82, 2016 | 2870 | 2016 |
| Intra-and inter-cellular rewiring of the human colon during ulcerative colitis CS Smillie, M Biton, J Ordovas-Montanes, KM Sullivan, G Burgin, ... Cell 178 (3), 714-730. e22, 2019 | 1093 | 2019 |
| High-definition spatial transcriptomics for in situ tissue profiling S Vickovic, G Eraslan, F Salmén, J Klughammer, L Stenbeck, D Schapiro, ... Nature methods 16 (10), 987-990, 2019 | 1011 | 2019 |
| Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram T Biancalani, G Scalia, L Buffoni, R Avasthi, Z Lu, A Sanger, N Tokcan, ... Nature methods 18 (11), 1352-1362, 2021 | 533 | 2021 |
| Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity E Berglund, J Maaskola, N Schultz, S Friedrich, M Marklund, ... Nature communications 9 (1), 2419, 2018 | 509 | 2018 |
| Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis S Maniatis, T Äijö, S Vickovic, C Braine, K Kang, A Mollbrink, ... Science 364 (6435), 89-93, 2019 | 414 | 2019 |
| Barcoded solid-phase RNA capture for Spatial Transcriptomics profiling in mammalian tissue sections F Salmén, PL Ståhl, A Mollbrink, JF Navarro, S Vickovic, J Frisen, ... Nature protocols 13 (11), 2501-2534, 2018 | 195 | 2018 |
| Spatially resolved transcriptome profiling in model plant species S Giacomello, F Salmén, BK Terebieniec, S Vickovic, JF Navarro, ... Nature plants 3 (6), 1-11, 2017 | 176 | 2017 |
| SM-Omics is an automated platform for high-throughput spatial multi-omics S Vickovic, B Lötstedt, J Klughammer, S Mages, Å Segerstolpe, ... Nature communications 13 (1), 795, 2022 | 119 | 2022 |
| Spatial detection of fetal marker genes expressed at low level in adult human heart tissue M Asp, F Salmén, PL Ståhl, S Vickovic, U Felldin, M Löfling, ... Scientific reports 7 (1), 12941, 2017 | 71 | 2017 |
| SenNet recommendations for detecting senescent cells in different tissues V Suryadevara, AD Hudgins, A Rajesh, A Pappalardo, A Karpova, AK Dey, ... Nature Reviews Molecular Cell Biology, 1-23, 2024 | 66 | 2024 |
| Massive and parallel expression profiling using microarrayed single-cell sequencing S Vickovic, PL Ståhl, F Salmén, S Giatrellis, JO Westholm, A Mollbrink, ... Nature communications 7 (1), 13182, 2016 | 52 | 2016 |
| Three-dimensional spatial transcriptomics uncovers cell type localizations in the human rheumatoid arthritis synovium S Vickovic, D Schapiro, K Carlberg, B Lötstedt, L Larsson, F Hildebrandt, ... Communications Biology 5 (1), 129, 2022 | 51 | 2022 |
| Spatial host–microbiome sequencing reveals niches in the mouse gut B Lötstedt, M Stražar, R Xavier, A Regev, S Vickovic Nature Biotechnology 42 (9), 1394-1403, 2024 | 43 | 2024 |
| DNA methylation: the future of crime scene investigation? B Gršković, D Zrnec, S Vicković, M Popović, G Mršić Molecular biology reports 40, 4349-4360, 2013 | 37 | 2013 |
| In silico tissue generation and power analysis for spatial omics EAG Baker, D Schapiro, B Dumitrascu, S Vickovic, A Regev Nature Methods 20 (3), 424-431, 2023 | 36* | 2023 |
| Multidimensional transcriptomics provides detailed information about immune cell distribution and identity in HER2+ breast tumors F Salmén, S Vickovic, L Larsson, L Stenbeck, J Vallon-Christersson, ... BioRxiv, 358937, 2018 | 25 | 2018 |
| Single cell analysis of cancer cells using an improved RT-MLPA method has potential for cancer diagnosis and monitoring L Kvastad, B Werne Solnestam, E Johansson, AO Nygren, N Laddach, ... Scientific Reports 5 (1), 16519, 2015 | 23 | 2015 |
| Magnetic bead assisted labeling of antibodies at nanogram scale M Dezfouli, S Vickovic, MJ Iglesias, P Nilsson, JM Schwenk, A Ahmadian Proteomics 14 (1), 14-18, 2014 | 20 | 2014 |
| Splotch: robust estimation of aligned spatial temporal gene expression data T Äijö, S Maniatis, S Vickovic, K Kang, M Cuevas, C Braine, H Phatnani, ... bioRxiv, 757096, 2019 | 14 | 2019 |