| Deep Learning for Biomedical Image Reconstruction: A Survey HB Yedder, B Cardoen, G Hamarneh Artificial Intelligence Review, 2020 | 111* | 2020 |
| Super resolution microscopy and deep learning identify Zika virus reorganization of the endoplasmic reticulum RKM Long, KP Moriarty, B Cardoen, G Gao, AW Vogl, F Jean, ... Scientific Reports 10 (1), 20937, 2020 | 28 | 2020 |
| Limited-angle diffuse optical tomography image reconstruction using deep learning H Ben Yedder, M Shokoufi, B Cardoen, F Golnaraghi, G Hamarneh Medical Image Computing and Computer Assisted Intervention–MICCAI 2019: 22nd …, 2019 | 27 | 2019 |
| Multitask deep learning reconstruction and localization of lesions in limited angle diffuse optical tomography HB Yedder, B Cardoen, M Shokoufi, F Golnaraghi, G Hamarneh IEEE Transactions on Medical Imaging 41 (3), 515-530, 2021 | 24 | 2021 |
| Membrane contact site detection (MCS-DETECT) reveals dual control of rough mitochondria–ER contacts B Cardoen, KR Vandevoorde, G Gao, M Ortiz-Silva, P Alan, W Liu, ... Journal of Cell Biology 223 (1), e202206109, 2023 | 16 | 2023 |
| Basal Gp78-dependent mitophagy promotes mitochondrial health and limits mitochondrial ROS P Alan, KR Vandevoorde, B Joshi, B Cardoen, G Gao, ... Cellular and Molecular Life Sciences 79 (11), 1-20, 2022 | 16 | 2022 |
| ERGO: Efficient recurrent graph optimized emitter density estimation in single molecule localization microscopy B Cardoen, HB Yedder, A Sharma, KC Chou, IR Nabi, G Hamarneh IEEE Transactions on Medical Imaging 39 (6), 1942-1956, 2019 | 11 | 2019 |
| A PDEVS simulator supporting multiple synchronization protocols: implementation and performance analysis B Cardoen, S Manhaeve, Y Van Tendeloo, J Broeckhove Simulation 94 (4), 281-300, 2018 | 11 | 2018 |
| SPECHT: Self-tuning Plausibility based object detection Enables quantification of Conflict in Heterogeneous multi-scale microscopy B Cardoen, T Wong, P Alan, S Lee, JA Matsubara, IR Nabi, G Hamarneh Plos one 17 (12), e0276726, 2022 | 6 | 2022 |
| AI analysis of super-resolution microscopy: Biological discovery in the absence of ground truth IR Nabi, B Cardoen, IM Khater, G Gao, TH Wong, G Hamarneh Journal of Cell Biology 223 (8), 2024 | 5 | 2024 |
| DataCurator. jl: efficient, portable and reproducible validation, curation and transformation of large heterogeneous datasets using human-readable recipes compiled into machine … B Cardoen, H Ben Yedder, S Lee, IR Nabi, G Hamarneh Bioinformatics Advances 3 (1), vbad068, 2023 | 5 | 2023 |
| Log-Paradox: Necessary and sufficient conditions for confounding statistically significant pattern reversal under the log-transform B Cardoen, HB Yedder, S Lee, IR Nabi, G Hamarneh arXiv preprint arXiv:2302.04780, 2023 | 4 | 2023 |
| Performance analysis of a PDEVS simulator supporting multiple synchronization protocols B Cardoen, S Manhaeve, T Tuijn, Y Van Tendeloo, K Vanmechelen, ... Proceedings of the Symposium on Theory of Modeling & Simulation, 4, 2016 | 4 | 2016 |
| Deep orthogonal multi-wavelength fusion for tomogram-free diagnosis in diffuse optical imaging HB Yedder, B Cardoen, M Shokoufi, F Golnaraghi, G Hamarneh Computers in Biology and Medicine, 108676, 2024 | 1 | 2024 |
| Orthogonal Multi-frequency Fusion Based Image Reconstruction and Diagnosis in Diffuse Optical Tomography HB Yedder, G Hamarneh, B Cardoen Authorea Preprints, 2023 | 1 | 2023 |
| SuperResNET: Model‐Free Single‐Molecule Network Analysis Software Achieves Molecular Resolution of Nup96 YL Li, IM Khater, C Hallgrimson, B Cardoen, TH Wong, G Hamarneh, ... Advanced Intelligent Systems, 2400521, 2024 | | 2024 |
| nERdy: network analysis of endoplasmic reticulum dynamics G Hamarneh, A Samudre, G Gao, B Cardoen, IR Nabi | | 2024 |
| Computational reconstruction of multiscale interaction in multichannel superresolution microscopy B Cardoen Simon Fraser University, 2024 | | 2024 |
| SuperResNET single molecule localization microscopy model-free network analysis of Nup96 achieves molecular resolution YL Li, IM Khater, C Hallgrimson, B Cardoen, TH Wong, G Hamarneh, ... | | 2024 |
| nERdy: network analysis of endoplasmic reticulum dynamics A Samudre, G Gao, B Cardoen, IR Nabi, G Hamarneh bioRxiv, 2024.02. 20.581259, 2024 | | 2024 |
Ghassan HamarnehComputing Science, Simon Fraser UniversityVerified email at sfu.ca
