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| Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences TS Mikkelsen, MJ Wakefield, B Aken, CT Amemiya, JL Chang, S Duke, ... Nature 447 (7141), 167-177, 2007 | 811 | 2007 |
| Genomic copy number dictates a gene-independent cell response to CRISPR/Cas9 targeting AJ Aguirre, RM Meyers, BA Weir, F Vazquez, CZ Zhang, U Ben-David, ... Cancer discovery 6 (8), 914-929, 2016 | 688 | 2016 |
| MNase titration reveals differences between nucleosome occupancy and chromatin accessibility J Mieczkowski, A Cook, SK Bowman, B Mueller, BH Alver, S Kundu, ... Nature communications 7, 2016 | 258 | 2016 |
| An Improved Canine Genome and a Comprehensive Catalogue of Coding Genes and Non-Coding Transcripts MP Hoeppner, A Lundquist, M Pirun, JRS Meadows, N Zamani, ... PloS one 9 (3), e91172, 2014 | 258 | 2014 |
| DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage MC Zody, M Garber, DJ Adams, T Sharpe, J Harrow, JR Lupski, ... Nature 440 (7087), 1045-1049, 2006 | 188 | 2006 |
| The breakpoint region of the most common isochromosome, i (17q), in human neoplasia is characterized by a complex genomic architecture with large, palindromic, low-copy repeats A Barbouti, P Stankiewicz, C Nusbaum, C Cuomo, A Cook, M Höglund, ... The American Journal of Human Genetics 74 (1), 1-10, 2004 | 149 | 2004 |
| DNA sequence and analysis of human chromosome 8 C Nusbaum, TS Mikkelsen, MC Zody, S Asakawa, S Taudien, M Garber, ... Nature 439 (7074), 331-335, 2006 | 148 | 2006 |
| Nucleosomal occupancy changes locally over key regulatory regions during cell differentiation and reprogramming JA West, A Cook, BH Alver, M Stadtfeld, AM Deaton, K Hochedlinger, ... Nature communications 5, 4719, 2014 | 104 | 2014 |
| Analysis of the DNA sequence and duplication history of human chromosome 15 MC Zody, M Garber, T Sharpe, SK Young, L Rowen, K O'Neill, ... Nature 440 (7084), 671-675, 2006 | 93 | 2006 |
| DNA sequence and analysis of human chromosome 18 C Nusbaum, MC Zody, ML Borowsky, M Kamal, CD Kodira, TD Taylor, ... Nature 437 (7058), 551-555, 2005 | 85 | 2005 |
| A radiation hybrid map of mouse genes TJ Hudson, DM Church, S Greenaway, H Nguyen, A Cook, RG Steen, ... Nature genetics 29 (2), 201-205, 2001 | 83 | 2001 |
| ATRX In-Frame Fusion Neuroblastoma Is Sensitive to EZH2 Inhibition via Modulation of Neuronal Gene Signatures ZA Qadeer, D Valle-Garcia, D Hasson, Z Sun, A Cook, C Nguyen, ... Cancer Cell, 2019 | 76 | 2019 |
| The amphioxus Hox cluster: characterization, comparative genomics, and evolution CT Amemiya, SJ Prohaska, A Hill‐Force, A Cook, J Wasserscheid, ... Journal of Experimental Zoology Part B: Molecular and Developmental …, 2008 | 76 | 2008 |
| MDM2 and MDM4 are therapeutic vulnerabilities in malignant rhabdoid tumors TP Howard, TE Arnoff, MR Song, AO Giacomelli, X Wang, AL Hong, ... Cancer research 79 (9), 2404-2414, 2019 | 61 | 2019 |
| The chordate ParaHox cluster DEK Ferrier, K Dewar, A Cook, JL Chang, A Hill-Force, C Amemiya Current Biology 15 (20), R820-R822, 2005 | 56 | 2005 |
| Adipose A Cook, C Cowan StemBook [Internet], 2009 | 24 | 2009 |
| Single‐assay profiling of nucleosome occupancy and chromatin accessibility A Cook, J Mieczkowski, MY Tolstorukov Current protocols in molecular biology 120 (1), 21.34. 1-21.34. 18, 2017 | 9 | 2017 |
| Compositions and methods for targeting cancer-specific sequence variations WC Hahn, A Aguirre, A Cook, G Cowley, R Meyers, DE Root, A Tsherniak, ... US Patent App. 15/298,895, 2017 | | 2017 |
