| Direct full-length RNA sequencing reveals unexpected transcriptome complexity during Caenorhabditis elegans development R Li, X Ren, Q Ding, Y Bi, D Xie, Z Zhao Genome research 30 (2), 287-298, 2020 | 65 | 2020 |
| A Genome-Wide Hybrid Incompatibility Landscape between Caenorhabditis briggsae and C. nigoni Y Bi, X Ren, C Yan, J Shao, D Xie, Z Zhao PLoS genetics 11 (2), e1004993, 2015 | 56 | 2015 |
| Collaborative regulation of development but independent control of metabolism by two epidermis-specific transcription factors in Caenorhabditis elegans J Shao, K He, H Wang, WS Ho, X Ren, X An, MK Wong, B Yan, D Xie, ... Journal of Biological Chemistry 288 (46), 33411-33426, 2013 | 32 | 2013 |
| Mtor signaling pathway regulates the release of proinflammatory molecule ccl5 implicated in the pathogenesis of autism spectrum disorder B Wang, Y Qin, Q Wu, X Li, D Xie, Z Zhao, S Duan Frontiers in Immunology 13, 818518, 2022 | 24 | 2022 |
| Genomic architecture of 5S rDNA cluster and its variations within and between species Q Ding, R Li, X Ren, L Chan, VWS Ho, D Xie, P Ye, Z Zhao BMC genomics 23 (1), 238, 2022 | 19 | 2022 |
| Specific Interactions Between Autosome and X Chromosomes Cause Hybrid Male Sterility in Caenorhabditis Species Y Bi, X Ren, R Li, Q Ding, D Xie, Z Zhao Genetics 212 (3), 801-813, 2019 | 16 | 2019 |
| Evaluation of nanoplastics toxicity in the soil nematode Caenorhabditis elegans by iTRAQ-based quantitative proteomics G Huang, Y Ma, D Xie, C Zhao, L Zhu, G Xie, P Wu, W Wang, Z Zhao, ... Science of The Total Environment 862, 160646, 2023 | 12 | 2023 |
| Technical challenges in defining RNA modifications G Huang, Q Ding, D Xie, Z Cai, Z Zhao Seminars in Cell & Developmental Biology 127, 155-165, 2022 | 11 | 2022 |
| Genetic exchange with an outcrossing sister species causes severe genome-wide dysregulation in a selfing Caenorhabditis nematode D Xie, P Ye, Y Ma, Y Li, X Liu, P Sarkies, Z Zhao Genome Research 32 (11-12), 2015-2027, 2022 | 9 | 2022 |
| Initial characterization of gap phase introduction in every cell cycle of C. elegans embryogenesis MK Wong, VWS Ho, X Huang, LY Chan, D Xie, R Li, X Ren, G Guan, Y Ma, ... Frontiers in Cell and Developmental Biology 10, 978962, 2022 | 5 | 2022 |
| High-throughput profiling of RNA modifications by ultra-performance liquid chromatography coupled to complementary mass spectrometry: Methods, quality control, and applications G Huang, F Zhang, D Xie, Y Ma, P Wang, G Cao, L Chen, S Lin, Z Zhao, ... Talanta 263, 124697, 2023 | 4 | 2023 |
| Efficient targeted recombination with CRISPR/Cas9 in hybrids of Caenorhabditis nematodes with suppressed recombination D Xie, B Gu, Y Liu, P Ye, Y Ma, T Wen, X Song, Z Zhao BMC biology 21 (1), 203, 2023 | 3 | 2023 |
| Highly efficient transgenesis with miniMos in Caenorhabditis briggsae Q Ding, X Ren, R Li, L Chan, VWS Ho, Y Bi, D Xie, Z Zhao G3 12 (12), jkac254, 2022 | 3 | 2022 |
| Genome wide screen reveals a specific interaction between autosome and X that is essential for hybrid male sterility Y Bi, X Ren, R Li, Q Ding, D Xie, Z Zhao BioRxiv, 496976, 2018 | 2 | 2018 |
| A stark difference in the profiles of defective viral transcripts between SARS-CoV-2 and SARS-CoV D Xie, H Chu, D Yang, Q Ding, G Huang, L Chen, Z Cai, J Huang, Z Zhao The Journal of Infection 83 (3), 381, 2021 | 1 | 2021 |
| A newborn F-box gene blocks gene flow by selectively degrading phosphoglucomutase in species hybrids D Xie, Y Ma, P Ye, Y Liu, Q Ding, G Huang, MA Félix, Z Cai, Z Zhao Proceedings of the National Academy of Sciences 121 (46), e2418037121, 2024 | | 2024 |
| Deep learning-based enhancement of fluorescence labeling for accurate cell lineage tracing during embryogenesis Z Li, D Xie, Y Ma, C Zhao, S You, H Yan, Z Zhao Bioinformatics 40 (11), btae626, 2024 | | 2024 |
| Genome-Wide Introgression Revealed Pervasive Hybrid Incompatibilities (HI) between Caenorhabditis species Y Bi, X Ren, C Yan, J Shao, D Xie, Z Zhao bioRxiv, 2014 | | 2014 |