| Comparison of 15 dinoflagellate genomes reveals extensive sequence and structural divergence in family Symbiodiniaceae and genus Symbiodinium RA González-Pech, TG Stephens, Y Chen, AR Mohamed, Y Cheng, ... BMC biology 19, 1-22, 2021 | 92 | 2021 |
| Genomic adaptations to an endolithic lifestyle in the coral-associated alga Ostreobium C Iha, KE Dougan, JA Varela, V Avila, CJ Jackson, KA Bogaert, Y Chen, ... Current Biology 31 (7), 1393-1402. e5, 2021 | 50 | 2021 |
| Evidence that inconsistent gene prediction can mislead analysis of dinoflagellate genomes Y Chen, RA González‐Pech, TG Stephens, D Bhattacharya, CX Chan Journal of phycology 56 (1), 6-10, 2020 | 45 | 2020 |
| Whole-genome duplication in an algal symbiont bolsters coral heat tolerance KE Dougan, AJ Bellantuono, T Kahlke, RM Abbriano, Y Chen, S Shah, ... Science Advances 10 (29), eadn2218, 2024 | 29* | 2024 |
| Comparative Genomics Supports That Brazilian Bioethanol Saccharomyces cerevisiae Comprise a Unified Group of Domesticated Strains Related to Cachaça … AP Jacobus, TG Stephens, P Youssef, R González-Pech, ... Frontiers in microbiology 12, 644089, 2021 | 28 | 2021 |
| Sex in Symbiodiniaceae dinoflagellates: genomic evidence for independent loss of the canonical synaptonemal complex S Shah, Y Chen, D Bhattacharya, CX Chan Scientific reports 10 (1), 9792, 2020 | 25 | 2020 |
| Improved Cladocopium goreaui Genome Assembly Reveals Features of a Facultative Coral Symbiont and the Complex Evolutionary History of Dinoflagellate Genes Y Chen, S Shah, KE Dougan, MJH van Oppen, D Bhattacharya, CX Chan Microorganisms 10 (8), 1662, 2022 | 22 | 2022 |
| Genome-powered classification of microbial eukaryotes: focus on coral algal symbionts KE Dougan, RA González-Pech, TG Stephens, S Shah, Y Chen, ... Trends in Microbiology 30 (9), 831-840, 2022 | 21 | 2022 |
| Alignment-free analysis of whole-genome sequences from Symbiodiniaceae reveals different phylogenetic signals in distinct regions R Lo, KE Dougan, Y Chen, S Shah, D Bhattacharya, CX Chan Frontiers in Plant Science 13, 815714, 2022 | 19 | 2022 |
| Multi-omics analysis reveals the molecular response to heat stress in a “red tide” dinoflagellate KE Dougan, ZL Deng, L Wöhlbrand, C Reuse, B Bunk, Y Chen, J Hartlich, ... Genome biology 24 (1), 265, 2023 | 18 | 2023 |
| Massive genome reduction predates the divergence of Symbiodiniaceae dinoflagellates S Shah, KE Dougan, Y Chen, R Lo, G Laird, MDA Fortuin, SK Rai, ... The ISME Journal 18 (1), wrae059, 2024 | 10* | 2024 |
| Gene duplication is the primary driver of intraspecific genomic divergence in coral algal symbionts S Shah, KE Dougan, Y Chen, D Bhattacharya, CX Chan Open Biology 13 (9), 230182, 2023 | 6 | 2023 |
| Nuclear genome of a pedinophyte pinpoints genomic innovation and streamlining in the green algae SI Repetti, C Iha, K Uthanumallian, CJ Jackson, Y Chen, CX Chan, ... New Phytologist 233 (5), 2144-2154, 2022 | 6 | 2022 |
| Genome-guided analysis of seven weed species reveals conserved sequence and structural features of key gene targets for herbicide development S Shah, T Lonhienne, CE Murray, Y Chen, KE Dougan, YS Low, ... Frontiers in Plant Science 13, 909073, 2022 | 5 | 2022 |
| Genome-wide transcriptome analysis reveals the diversity and function of long non-coding RNAs in dinoflagellates Y Chen, KE Dougan, Q Nguyen, D Bhattacharya, CX Chan NAR Genomics and Bioinformatics 6 (1), lqae016, 2024 | 4 | 2024 |
| Nuclear genomes of dinoflagellates reveal evolutionarily conserved pattern of RNA editing relative to stress response Y Chen, KE Dougan, D Bhattacharya, CX Chan Frontiers in Protistology 2, 1320917, 2024 | | 2024 |
Cheong Xin ChanAustralian Centre for Ecogenomics, Sch. Chemistry & Molecular Biosciences, University ofVerified email at uq.edu.au