Joao Pedro de Magalhaes

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George ChurchHarvard Medical SchoolVerified email at harvard.edu
Jia MengDept of Biosciences and Bioinformatics, Xi'an Jiaotong-Liverpool UniversityVerified email at xjtlu.edu.cn
Daniel RigdenProfessor, Department of Biochemistry, Cell and Systems Biology, ISMIB, University of LiverpoolVerified email at liverpool.ac.uk
Freitas, Alex A.Professor of Computational Intelligence, University of KentVerified email at kent.ac.uk
Kasit ChatsirisupachaiPostdoctoral Fellow, Genome Biology Unit, EMBL HeidelbergVerified email at embl.de
Florence ChainiauxUniversité de NamurVerified email at unamur.be
Shona WoodUniversity of TromsøVerified email at uit.no
Daniela Tejada-MartinezPostdoctoral researcher | Department of Anthropology | Tucci lab, Human Evolutionary Genomics | YaleVerified email at yale.edu
Yang I LiUniversity of ChicagoVerified email at uchicago.edu
Anis LarbiBeckman Coulter Life SciencesVerified email at beckman.com
Alexey MoskalevInstitute of longevity, Russian Scientific Center of Surgery named after Academician B.V. PetrovskyVerified email at med.ru
Alex Zhavoronkov (Aleksandrs Zavoro...Insilico MedicineVerified email at insilico.com
Vadim GladyshevProfessor of Medicine, Brigham and Women's Hospital, Harvard Medical SchoolVerified email at rics.bwh.harvard.edu
Georges JanssensAssistant Professor, AMC, Amsterdam, The NetherlandsVerified email at amc.nl
Lude FrankeProfessor of Functional Genomics, University Medical Centre GroningenVerified email at cleverfranke.com
Alexandra StolzingLoughborough UniversityVerified email at lboro.ac.uk
Joao CuradoFlomics Biotech, Barcelona, SpainVerified email at flomics.com
Brian KennedyNational University of SingaporeVerified email at nus.edu.sg
Luminita ParaoanProfessor of Molecular Cell Biology, Edge Hill UniversityVerified email at edgehill.ac.uk
Adiv JohnsonTally HealthVerified email at tallyhealth.com

Joao Pedro de Magalhaes

University of Birmingham

Verified email at bham.ac.uk - Homepage

aging genomics bioinformatics evolution cellular senescence


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Gene co-expression analysis for functional classification and gene–disease predictions S Van Dam, U Vosa, A van der Graaf, L Franke, JP de Magalhaes Briefings in bioinformatics 19 (4), 575-592, 2018	1096	2018
Meta-analysis of age-related gene expression profiles identifies common signatures of aging JP De Magalhães, J Curado, GM Church Bioinformatics 25 (7), 875-881, 2009	870	2009
RNA-Seq signatures normalized by mRNA abundance allow absolute deconvolution of human immune cell types G Monaco, B Lee, W Xu, S Mustafah, YY Hwang, C Carré, N Burdin, ... Cell reports 26 (6), 1627-1640. e7, 2019	780	2019
Human ageing genomic resources: new and updated databases R Tacutu, D Thornton, E Johnson, A Budovsky, D Barardo, T Craig, ... Nucleic acids research 46 (D1), D1083-D1090, 2018	668	2018
A database of vertebrate longevity records and their relation to other life‐history traits JP De Magalhaes, J Costa Journal of evolutionary biology 22 (8), 1770-1774, 2009	622	2009
Human Ageing Genomic Resources: integrated databases and tools for the biology and genetics of ageing R Tacutu, T Craig, A Budovsky, D Wuttke, G Lehmann, D Taranukha, ... Nucleic acids research 41 (D1), D1027-D1033, 2012	605	2012
The role of DNA methylation in aging, rejuvenation, and age-related disease AA Johnson, K Akman, SRG Calimport, D Wuttke, A Stolzing, ... Rejuvenation research 15 (5), 483-494, 2012	432	2012
How ageing processes influence cancer JP De Magalhães Nature Reviews Cancer 13 (5), 357-365, 2013	427	2013
An analysis of the relationship between metabolism, developmental schedules, and longevity using phylogenetic independent contrasts JP Magalhães, J Costa, GM Church The Journals of Gerontology Series A: Biological Sciences and Medical …, 2007	421	2007
Insights into the evolution of longevity from the bowhead whale genome M Keane, J Semeiks, AE Webb, YI Li, V Quesada, T Craig, LB Madsen, ... Cell reports 10 (1), 112-122, 2015	388	2015
Stress, cell senescence and organismal ageing JP de Magalhães, JF Passos Mechanisms of ageing and development 170, 2-9, 2018	366	2018
Subcytotoxic H2O2 stress triggers a release of transforming growth factor-β1, which induces biomarkers of cellular senescence of human diploid fibroblasts C Frippiat, QM Chen, S Zdanov, JP Magalhaes, J Remacle, O Toussaint Journal of Biological Chemistry 276 (4), 2531-2537, 2001	366	2001
Longer lifespan in male mice treated with a weakly estrogenic agonist, an antioxidant, an α‐glucosidase inhibitor or a Nrf2‐inducer R Strong, RA Miller, A Antebi, CM Astle, M Bogue, MS Denzel, ... Aging cell 15 (5), 872-884, 2016	349	2016
A review and appraisal of the DNA damage theory of ageing AA Freitas, JP De Magalhães Mutation Research/Reviews in Mutation Research 728 (1-2), 12-22, 2011	301	2011
A multidimensional systems biology analysis of cellular senescence in aging and disease RA Avelar, JG Ortega, R Tacutu, EJ Tyler, D Bennett, P Binetti, ... Genome biology 21, 1-22, 2020	281	2020
m⁶A-Atlas: a comprehensive knowledgebase for unraveling the N⁶-methyladenosine (m⁶A) epitranscriptome Y Tang, K Chen, B Song, J Ma, X Wu, Q Xu, Z Wei, J Su, G Liu, R Rong, ... Nucleic acids research 49 (D1), D134-D143, 2021	249	2021
The Human Ageing Genomic Resources: online databases and tools for biogerontologists JP De Magalhaes, A Budovsky, G Lehmann, J Costa, Y Li, V Fraifeld, ... Aging cell 8 (1), 65-72, 2009	242	2009
flowAI: automatic and interactive anomaly discerning tools for flow cytometry data G Monaco, H Chen, M Poidinger, J Chen, JP de Magalhães, A Larbi Bioinformatics 32 (16), 2473-2480, 2016	239	2016
HAGR: the human ageing genomic resources JP de Magalhaes, J Costa, O Toussaint Nucleic acids research 33 (suppl_1), D537-D543, 2005	207*	2005
WHISTLE: a high-accuracy map of the human N⁶-methyladenosine (m⁶A) epitranscriptome predicted using a machine learning approach K Chen, Z Wei, Q Zhang, X Wu, R Rong, Z Lu, J Su, JP De Magalhães, ... Nucleic acids research 47 (7), e41-e41, 2019	204	2019

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