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| A multi-level study of recombinant Pichia pastoris in different oxygen conditions K Baumann, M Carnicer, M Dragosits, AB Graf, J Stadlmann, P Jouhten, ... BMC systems biology 4, 1-22, 2010 | 184 | 2010 |
| Oxygen dependence of metabolic fluxes and energy generation of Saccharomyces cerevisiae CEN.PK113-1A P Jouhten, E Rintala, A Huuskonen, A Tamminen, M Toivari, M Wiebe, ... BMC systems biology 2, 1-19, 2008 | 145 | 2008 |
| Metabolic flux profiling of recombinant protein secreting Pichia pastoris growing on glucose:methanol mixtures J Jordà, P Jouhten, E Cámara, H Maaheimo, J Albiol, P Ferrer Microbial cell factories 11, 1-14, 2012 | 141 | 2012 |
| Metabolic flux profiling of Pichia pastoris grown on glycerol/methanol mixtures in chemostat cultures at low and high dilution rates A Sola, P Jouhten, H Maaheimo, F Sanchez-Ferrando, T Szyperski, ... Microbiology 153 (1), 281-290, 2007 | 130 | 2007 |
| Comparative genome-scale reconstruction of gapless metabolic networks for present and ancestral species E Pitkänen, P Jouhten, J Hou, MF Syed, P Blomberg, J Kludas, M Oja, ... PLoS computational biology 10 (2), e1003465, 2014 | 110 | 2014 |
| Central carbon metabolism of Saccharomyces cerevisiae in anaerobic, oxygen-limited and fully aerobic steady-state conditions and following a shift to anaerobic … MG Wiebe, E Rintala, A Tamminen, H Simolin, L Salusjärvi, M Toivari, ... FEMS Yeast research 8 (1), 140-154, 2008 | 93 | 2008 |
| Inferring branching pathways in genome-scale metabolic networks E Pitkänen, P Jouhten, J Rousu BMC systems biology 3, 1-22, 2009 | 91 | 2009 |
| Saccharomyces cerevisiae metabolism in ecological context P Jouhten, O Ponomarova, R Gonzalez, KR Patil FEMS yeast research 16 (7), fow080, 2016 | 77 | 2016 |
| Correlation of gene expression and protein production rate-a system wide study M Arvas, T Pakula, B Smit, J Rautio, H Koivistoinen, P Jouhten, E Lindfors, ... BMC genomics 12, 1-25, 2011 | 76 | 2011 |
| Laboratory evolution reveals regulatory and metabolic trade-offs of glycerol utilization in Saccharomyces cerevisiae T Strucko, K Zirngibl, F Pereira, E Kafkia, ET Mohamed, M Rettel, F Stein, ... Metabolic engineering 47, 73-82, 2018 | 64 | 2018 |
| Hypoxia and GABA shunt activation in the pathogenesis of Alzheimer's disease A Salminen, P Jouhten, T Sarajärvi, A Haapasalo, M Hiltunen Neurochemistry international 92, 13-24, 2016 | 63 | 2016 |
| Adaptive laboratory evolution of ale and lager yeasts for improved brewing efficiency and beer quality B Gibson, M Dahabieh, K Krogerus, P Jouhten, F Magalhães, R Pereira, ... Annual review of food science and technology 11 (1), 23-44, 2020 | 58 | 2020 |
| An analytic and systematic framework for estimating metabolic flux ratios from 13C tracer experiments A Rantanen, J Rousu, P Jouhten, N Zamboni, H Maaheimo, E Ukkonen BMC bioinformatics 9, 1-19, 2008 | 55 | 2008 |
| l‐galactonate dehydratase is part of the fungal path for d‐galacturonic acid catabolism S Kuorelahti, P Jouhten, H Maaheimo, M Penttilä, P Richard Molecular microbiology 61 (4), 1060-1068, 2006 | 55 | 2006 |
| Operation of a TCA cycle subnetwork in the mammalian nucleus E Kafkia, A Andres-Pons, K Ganter, M Seiler, TS Smith, A Andrejeva, ... Science advances 8 (35), eabq5206, 2022 | 46 | 2022 |
| Yeast metabolic chassis designs for diverse biotechnological products P Jouhten, T Boruta, S Andrejev, F Pereira, I Rocha, KR Patil Scientific reports 6 (1), 29694, 2016 | 45 | 2016 |
| Enhanced Triacylglycerol Production With Genetically Modified Trichosporon oleaginosus K Koivuranta, S Castillo, P Jouhten, L Ruohonen, M Penttilä, MG Wiebe Frontiers in microbiology 9, 1337, 2018 | 41 | 2018 |
| Transcriptional Responses of Saccharomyces cerevisiae to Shift from Respiratory and Respirofermentative to Fully Fermentative Metabolism E Rintala, P Jouhten, M Toivari, MG Wiebe, H Maaheimo, M Penttilä, ... Omics: a journal of integrative biology 15 (7-8), 461-476, 2011 | 38 | 2011 |
| Adaptive laboratory evolution of microbial co‐cultures for improved metabolite secretion D Konstantinidis, F Pereira, EM Geissen, K Grkovska, E Kafkia, P Jouhten, ... Molecular systems biology 17 (8), e10189, 2021 | 35 | 2021 |
