| The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes R Overbeek, T Begley, RM Butler, JV Choudhuri, HY Chuang, M Cohoon, ... Nucleic acids research 33 (17), 5691-5702, 2005 | 2353 | 2005 |
| Towards environmental systems biology of Shewanella JK Fredrickson, MF Romine, AS Beliaev, JM Auchtung, ME Driscoll, ... Nature Reviews Microbiology 6 (8), 592-603, 2008 | 1085 | 2008 |
| Gut bacteria that prevent growth impairments transmitted by microbiota from malnourished children LV Blanton, MR Charbonneau, T Salih, MJ Barratt, S Venkatesh, ... Science 351 (6275), aad3311, 2016 | 775 | 2016 |
| Comparative genomics of the vitamin B12 metabolism and regulation in prokaryotes DA Rodionov, AG Vitreschak, AA Mironov, MS Gelfand Journal of Biological Chemistry 278 (42), 41148-41159, 2003 | 557 | 2003 |
| Comparative genomics of thiamin biosynthesis in procaryotes: new genes and regulatory mechanisms DA Rodionov, AG Vitreschak, AA Mironov, MS Gelfand Journal of Biological chemistry 277 (50), 48949-48959, 2002 | 455 | 2002 |
| Riboswitches: the oldest mechanism for the regulation of gene expression? AG Vitreschak, DA Rodionov, AA Mironov, MS Gelfand TRENDS in Genetics 20 (1), 44-50, 2004 | 437 | 2004 |
| Regulation of riboflavin biosynthesis and transport genes in bacteria by transcriptional and translational attenuation AG Vitreschak, DA Rodionov, AA Mironov, MS Gelfand Nucleic acids research 30 (14), 3141-3151, 2002 | 413 | 2002 |
| RegPrecise 3.0–a resource for genome-scale exploration of transcriptional regulation in bacteria PS Novichkov, AE Kazakov, DA Ravcheev, SA Leyn, GY Kovaleva, ... BMC genomics 14, 1-12, 2013 | 412 | 2013 |
| New substrates for TonB-dependent transport: do we only see the ‘tip of the iceberg’? K Schauer, DA Rodionov, H de Reuse Trends in biochemical sciences 33 (7), 330-338, 2008 | 407 | 2008 |
| Effects of microbiota-directed foods in gnotobiotic animals and undernourished children JL Gehrig, S Venkatesh, HW Chang, MC Hibberd, VL Kung, J Cheng, ... Science 365 (6449), eaau4732, 2019 | 399 | 2019 |
| Comparative and functional genomic analysis of prokaryotic nickel and cobalt uptake transporters: evidence for a novel group of ATP-binding cassette transporters DA Rodionov, P Hebbeln, MS Gelfand, T Eitinger Journal of bacteriology 188 (1), 317-327, 2006 | 360 | 2006 |
| A novel class of modular transporters for vitamins in prokaryotes DA Rodionov, P Hebbeln, A Eudes, J ter Beek, IA Rodionova, GB Erkens, ... Journal of bacteriology 191 (1), 42-51, 2009 | 350 | 2009 |
| Dissimilatory metabolism of nitrogen oxides in bacteria: comparative reconstruction of transcriptional networks DA Rodionov, IL Dubchak, AP Arkin, EJ Alm, MS Gelfand PLoS computational biology 1 (5), e55, 2005 | 345 | 2005 |
| Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization Y Zhang, DA Rodionov, MS Gelfand, VN Gladyshev BMC genomics 10, 1-26, 2009 | 333 | 2009 |
| IscR‐dependent gene expression links iron‐sulphur cluster assembly to the control of O2‐regulated genes in Escherichia coli JL Giel, D Rodionov, M Liu, FR Blattner, PJ Kiley Molecular microbiology 60 (4), 1058-1075, 2006 | 330 | 2006 |
| Canonical and ECF-type ATP-binding cassette importers in prokaryotes: diversity in modular organization and cellular functions T Eitinger, DA Rodionov, M Grote, E Schneider FEMS microbiology reviews 35 (1), 3-67, 2011 | 260 | 2011 |
| Regulation of the vitamin B12 metabolism and transport in bacteria by a conserved RNA structural element AG Vitreschak, DA Rodionov, AA Mironov, MS Gelfand Rna 9 (9), 1084-1097, 2003 | 257 | 2003 |
| Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides M Wu, NP McNulty, DA Rodionov, MS Khoroshkin, NW Griffin, J Cheng, ... Science 350 (6256), aac5992, 2015 | 252 | 2015 |
| Comparative genomic reconstruction of transcriptional regulatory networks in bacteria DA Rodionov Chemical reviews 107 (8), 3467-3497, 2007 | 252 | 2007 |
| Global transcriptional control by glucose and carbon regulator CcpA in Clostridium difficile A Antunes, E Camiade, M Monot, E Courtois, F Barbut, NV Sernova, ... Nucleic acids research 40 (21), 10701-10718, 2012 | 250 | 2012 |
