Virtual screening and molecular dynamics simulation study of plant-derived compounds to identify potential inhibitors of main protease from SARS-CoV-2 TBEMAS Shafi Mahmud, Mohammad Abu Raihan Uddin , Gobindo Kumar Paul, Mst ... Briefings in Bioinformatics, 1-13;doi: 10.1093/bib/bbaa428, 2021 | 104* | 2021 |
Efficacy of Phytochemicals Derived from Avicennia officinalis for the Management of COVID-19: A Combined In Silico and Biochemical Study S Mahmud, GK Paul, M Afroze, S Islam, SBR Gupt, MH Razu, S Biswas, ... Molecules 26 (8), 2210, 2021 | 99 | 2021 |
Screening of phytochemicals as potent inhibitor of 3-chymotrypsin and papain-like proteases of SARS-CoV2: An in-silico approach to combat COVID-19. SMMAS Ananta Swargiary Journal of Biomolecular Structure and Dynamics, 2020 | 90* | 2020 |
Fermentation optimization of cellulase production from sugarcane bagasse by Bacillus pseudomycoides and molecular modeling study of cellulase SK Pramanik, S Mahmud, GK Paul, T Jabin, K Naher, MS Uddin, S Zaman, ... Current research in microbial sciences 2, 100013, 2021 | 78 | 2021 |
Designing a multi-epitope vaccine candidate to combat MERS-CoV by employing an immunoinformatics approach S Mahmud, MO Rafi, GK Paul, MM Promi, MSS Shimu, S Biswas, ... Scientific Reports 11 (1), 15431, 2021 | 77 | 2021 |
Antiviral peptides against the main protease of SARS-CoV-2: A molecular docking and dynamics study S Mahmud, S Biswas, GK Paul, MA Mita, S Afrose, MR Hasan, ... Arabian journal of chemistry 14 (9), 103315, 2021 | 69 | 2021 |
Synthesis, antimicrobial, anticancer, PASS, molecular docking, molecular dynamic simulations & pharmacokinetic predictions of some methyl β-D-galactopyranoside analogs MR Amin, F Yasmin, MA Hosen, S Dey, S Mahmud, MA Saleh, TB Emran, ... Molecules 26 (22), 7016, 2021 | 60 | 2021 |
Plant-based phytochemical screening by targeting main protease of SARS-CoV-2 to design effective potent inhibitors S Mahmud, S Biswas, GK Paul, MA Mita, MM Promi, S Afrose, MR Hasan, ... Biology 10 (7), 589, 2021 | 60 | 2021 |
Synthesis, antimicrobial, molecular docking and molecular dynamics studies of lauroyl thymidine analogs against SARS-CoV-2: POM study and identification of the pharmacophore sites MA Hosen, NS Munia, M Al-Ghorbani, M Baashen, FA Almalki, TB Hadda, ... Bioorganic Chemistry 125, 105850, 2022 | 58 | 2022 |
Methyl β-D-galactopyranoside esters as potential inhibitors for SARS-CoV-2 protease enzyme: synthesis, antimicrobial, PASS, molecular docking, molecular dynamics simulations … MR Amin, F Yasmin, S Dey, S Mahmud, MA Saleh, TB Emran, I Hasan, ... Glycoconjugate journal, 1-30, 2021 | 56 | 2021 |
Molecular docking and dynamics study of natural compound for potential inhibition of main protease of SARS-CoV-2 ASAMAS Shafi Mahmud , Mohammad Abu Raihan Uddin , Meemtaheena Zaman , Khaled ... Journal of Biomolecular Structure and Dynamics, 2020 | 54* | 2020 |
Molecular docking and dynamics study to explore phytochemical ligand molecules against the main protease of SARS-CoV-2 from extensive phytochemical datasets S Mahmud, MA Mita, S Biswas, GK Paul, MM Promi, S Afrose, R Hasan, ... Expert Review of Clinical Pharmacology 14 (10), 1305-1315, 2021 | 48 | 2021 |
Molecular docking and dynamics studies to explore effective inhibitory peptides against the spike receptor binding domain of SARS-CoV-2 S Biswas, S Mahmud, MA Mita, S Afrose, MR Hasan, MS Sultana Shimu, ... Frontiers in Molecular Biosciences 8, 791642, 2022 | 43 | 2022 |
Prospective role of peptide-based antiviral therapy against the main protease of SARS-CoV-2 S Mahmud, GK Paul, S Biswas, S Afrose, MA Mita, MR Hasan, ... Frontiers in Molecular Biosciences 8, 628585, 2021 | 40 | 2021 |
Computational Discovery of Plant-Based Inhibitors against Human Carbonic Anhydrase IX and Molecular Dynamics Simulation UKAMAS Shafi Mahmud, Ekhtiar Rahman, Zulkar Nain, Mutasim Billah, Sumon ... Journal of Biomolecular Structure and Dynamics, DOI: 10.1080/07391102.2020 …, 2020 | 36* | 2020 |
Molecular Docking and Dynamics Simulation of Natural Compounds from Betel Leaves (Piper betle L.) for Investigating the Potential Inhibition of Alpha-Amylase … S Ahmed, MC Ali, RA Ruma, S Mahmud, GK Paul, MA Saleh, ... Molecules 27 (14), 4526, 2022 | 34 | 2022 |
Analysis of SYK gene as a prognostic biomarker and suggested potential bioactive phytochemicals as an alternative therapeutic option for colorectal cancer: an in-silico … P Biswas, D Dey, A Rahman, MA Islam, TF Susmi, MA Kaium, MN Hasan, ... Journal of Personalized Medicine 11 (9), 888, 2021 | 31 | 2021 |
In silico analysis of nonsynonymous single nucleotide polymorphisms of the human adiponectin receptor 2 (ADIPOR2) gene M Solayman, MA Saleh, S Paul, MI Khalil, SH Gan Computational Biology and Chemistry 68, 175-185, 2017 | 29 | 2017 |
Effect of banana extract on growth and development of protocorm like bodies in Dendrobium sp. orchid. MO Islam, MS Islam, MA Saleh | 26 | 2015 |
Screening of potent phytochemical inhibitors against SARS-CoV-2 main protease: an integrative computational approach S Mahmud, MR Hasan, S Biswas, GK Paul, S Afrose, MA Mita, ... Frontiers in Bioinformatics 1, 717141, 2021 | 25 | 2021 |