| Estimating maximal microbial growth rates from cultures, metagenomes, and single cells via codon usage patterns JL Weissman, S Hou, JA Fuhrman Proceedings of the National Academy of Sciences 118 (12), e2016810118, 2021 | 202 | 2021 |
| Immune loss as a driver of coexistence during host-phage coevolution JL Weissman, R Holmes, R Barrangou, S Moineau, WF Fagan, B Levin, ... The ISME journal, 2018 | 65 | 2018 |
| Linking high GC content to the repair of double strand breaks in prokaryotic genomes JL Weissman, WF Fagan, PLF Johnson PLoS genetics 15 (11), e1008493, 2019 | 59 | 2019 |
| Visualization and prediction of CRISPR incidence in microbial trait-space to identify drivers of antiviral immune strategy JL Weissman, RMR Laljani, WF Fagan, PLF Johnson The ISME journal 13 (10), 2589-2602, 2019 | 45 | 2019 |
| Trait-based analysis of the human skin microbiome S Bewick, E Gurarie, JL Weissman, J Beattie, C Davati, R Flint, P Thielen, ... Microbiome 7, 1-15, 2019 | 35 | 2019 |
| Selective Maintenance of Multiple CRISPR Arrays Across Prokaryotes JL Weissman, WF Fagan, PLF Johnson The CRISPR Journal 1 (6), 405-413, 2018 | 27 | 2018 |
| Avoidance of self during CRISPR immunization JL Weissman, A Stoltzfus, ER Westra, PLF Johnson Trends in microbiology 28 (7), 543-553, 2020 | 26 | 2020 |
| What is microbial dormancy? MD McDonald, C Owusu-Ansah, JB Ellenbogen, ZD Malone, MP Ricketts, ... Trends in Microbiology, 2024 | 25 | 2024 |
| Ribosome-linked mRNA-rRNA chimeras reveal active novel virus host associations JC Ignacio-Espinoza, SM Laperriere, YC Yeh, J Weissman, S Hou, ... BioRxiv, 2020.10. 30.332502, 2020 | 15 | 2020 |
| NetGAM: Using generalized additive models to improve the predictive power of ecological network analyses constructed using time-series data SJ Gleich, JA Cram, JL Weissman, DA Caron ISME communications 2 (1), 23, 2022 | 10 | 2022 |
| Benchmarking community-wide estimates of growth potential from metagenomes using codon usage statistics JL Weissman, M Peras, TP Barnum, JA Fuhrman Msystems 7 (5), e00745-22, 2022 | 9 | 2022 |
| Building a queer-and trans-inclusive microbiology conference R Gregor, J Johnston, LSY Coe, N Evans, D Forsythe, R Jones, ... Msystems 8 (5), e00433-23, 2023 | 8 | 2023 |
| Exploring the functional composition of the human microbiome using a hand-curated microbial trait database JL Weissman, S Dogra, K Javadi, S Bolten, R Flint, C Davati, J Beattie, ... BMC bioinformatics 22, 1-21, 2021 | 8 | 2021 |
| Immune lag is a major cost of prokaryotic adaptive immunity during viral outbreaks JL Weissman, EO Alseth, S Meaden, ER Westra, JA Fuhrman Proceedings of the Royal Society B 288 (1961), 20211555, 2021 | 7 | 2021 |
| Symbiotic UCYN-A strains co-occurred with El Niño, relaxed upwelling, and varied eukaryotes over 10 years off Southern California C Fletcher-Hoppe, YC Yeh, Y Raut, JL Weissman, JA Fuhrman ISME communications 3 (1), 63, 2023 | 6* | 2023 |
| Oxygen intrusions sustain aerobic nitrite-oxidizing bacteria in anoxic marine zones PJ Buchanan, X Sun, JL Weissman, D McCoy, D Bianchi, E Zakem bioRxiv, 2023.02. 22.529547, 2023 | 6 | 2023 |
| Estimating the maximal growth rates of eukaryotic microbes from cultures and metagenomes via codon usage patterns JL Weissman, ERO Dimbo, AI Krinos, C Neely, Y Yagües, D Nolin, S Hou, ... bioRxiv, 2021.10. 15.464604, 2021 | 6 | 2021 |
| Trait-based analysis of the human skin microbiome. Microbiome 7: 101 S Bewick, E Gurarie, JL Weissman, J Beattie, C Davati, R Flint, P Thielen, ... | 6 | 2019 |
| The Bioinformatics Virtual Coordination Network: An open-source and interactive learning environment BJ Tully, J Buongiorno, AB Cohen, JA Cram, AI Garber, SK Hu, AI Krinos, ... Frontiers in Education 6, 711618, 2021 | 4 | 2021 |
| NCBI’s virus discovery codeathon: building “FIVE”—The Federated Index of Viral Experiments API index J Martí-Carreras, AR Gener, SD Miller, AF Brito, CE Camacho, R Connor, ... Viruses 12 (12), 1424, 2020 | 4 | 2020 |
Philip L F JohnsonAssociate Professor, University of Maryland - College ParkVerified email at umd.edu
