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Korolev Nikolay
Korolev Nikolay
School of Biological Sciences, Nanyang Technological University
Verified email at ntu.edu.sg
Title
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Cited by
Year
The effects of histone H4 tail acetylations on cation-induced chromatin folding and self-association
A Allahverdi, R Yang, N Korolev, Y Fan, CA Davey, CF Liu, ...
Nucleic acids research 39 (5), 1680-1691, 2011
2672011
A direct method for site‐specific protein acetylation
F Li, A Allahverdi, R Yang, GBJ Lua, X Zhang, Y Cao, N Korolev, ...
Angewandte Chemie International Edition 41 (50), 9611-9614, 2011
1562011
On the competition between water, sodium ions, and spermine in binding to DNA: a molecular dynamics computer simulation study
N Korolev, AP Lyubartsev, A Laaksonen, L Nordenskiöld
Biophysical journal 82 (6), 2860-2875, 2002
1382002
Competitive binding of Mg2+, Ca2+, Na+, and K+ ions to DNA in oriented DNA fibers: experimental and Monte Carlo simulation results
N Korolev, AP Lyubartsev, A Rupprecht, L Nordenskiöld
Biophysical journal 77 (5), 2736-2749, 1999
1341999
Similarities and differences in interaction of K + and Na + with condensed ordered DNA. A molecular dynamics computer simulation study
Y Cheng, N Korolev, L Nordenskiöld
Nucleic acids research 34 (2), 686-696, 2006
1142006
Polyamine–nucleic acid interactions and the effects on structure in oriented DNA fibers
L van Dam, N Korolev, L Nordenskiöld
Nucleic acids research 30 (2), 419-428, 2002
1082002
Chromatin compaction under mixed salt conditions: opposite effects of sodium and potassium ions on nucleosome array folding
A Allahverdi, Q Chen, N Korolev, L Nordenskiöld
Scientific reports 5 (1), 8512, 2015
992015
Physicochemical analysis of electrostatic foundation for DNA–protein interactions in chromatin transformations
N Korolev, OV Vorontsova, L Nordenskiöld
Progress in biophysics and molecular biology 95 (1-3), 23-49, 2007
992007
A molecular dynamics simulation study of oriented DNA with polyamine and sodium counterions: diffusion and averaged binding of water and cations
N Korolev, AP Lyubartsev, A Laaksonen, L NordenskioÈld
Nucleic acids research 31 (20), 5971-5981, 2003
972003
The polyelectrolyte properties of chromatin
N Korolev, A Allahverdi, AP Lyubartsev, L Nordenskiöld
Soft Matter 8 (36), 9322-9333, 2012
942012
Influence of histone tails and H4 tail acetylations on nucleosome–nucleosome interactions
Y Liu, C Lu, Y Yang, Y Fan, R Yang, CF Liu, N Korolev, L Nordenskiöld
Journal of molecular biology 414 (5), 749-764, 2011
902011
A universal description for the experimental behavior of salt-(in) dependent oligocation-induced DNA condensation
N Korolev, NV Berezhnoy, KD Eom, JP Tam, L Nordenskiöld
Nucleic acids research 37 (21), 7137-7150, 2009
882009
Electrostatic origin of salt-induced nucleosome array compaction
N Korolev, A Allahverdi, Y Yang, Y Fan, AP Lyubartsev, L Nordenskiöld
Biophysical journal 99 (6), 1896-1905, 2010
862010
Spermine: an “invisible” component in the crystals of B-DNA. A grand canonical Monte Carlo and molecular dynamics simulation study
N Korolev, AP Lyubartsev, L Nordenskiöld, A Laaksonen
Journal of Molecular Biology 308 (5), 907-917, 2001
842001
Computer modeling demonstrates that electrostatic attraction of nucleosomal DNA is mediated by histone tails
N Korolev, AP Lyubartsev, L Nordenskiöld
Biophysical journal 90 (12), 4305-4316, 2006
822006
Regulation of nucleosome stacking and chromatin compaction by the histone H4 N-terminal tail–H2A acidic patch interaction
Q Chen, R Yang, N Korolev, CF Liu, L Nordenskiöld
Journal of molecular biology 429 (13), 2075-2092, 2017
812017
Electrical conduction in native deoxyribonucleic acid: Hole hopping transfer mechanism?
Z Kutnjak, C Filipič, R Podgornik, L Nordenskiöld, N Korolev
Physical review letters 90 (9), 098101, 2003
802003
A coarse-grained DNA model parameterized from atomistic simulations by inverse Monte Carlo
N Korolev, D Luo, AP Lyubartsev, L Nordenskiöld
Polymers 6 (6), 1655-1675, 2014
772014
Application of polyelectrolyte theories for analysis of DNA melting in the presence of Na+ and Mg2+ ions
N Korolev, AP Lyubartsev, L Nordenskiöld
Biophysical journal 75 (6), 3041-3056, 1998
751998
An advanced coarse-grained nucleosome core particle model for computer simulations of nucleosome-nucleosome interactions under varying ionic conditions
Y Fan, N Korolev, AP Lyubartsev, L Nordenskiöld
PLoS One 8 (2), e54228, 2013
632013
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