| Single-cell transcriptomics uncovers a non-autonomous Tbx1-dependent genetic program controlling cardiac neural crest cell development C De Bono, Y Liu, A Ferrena, A Valentine, D Zheng, BE Morrow Nature communications 14 (1), 1551, 2023 | 22 | 2023 |
| The interaction of SKP2 with p27 enhances the progression and stemness of osteosarcoma J Wang, O Aldahamsheh, A Ferrena, H Borjihan, A Singla, S Yaguare, ... Annals of the New York Academy of Sciences 1490 (1), 90-104, 2021 | 17 | 2021 |
| Systematic comparison of pancreatic ductal adenocarcinoma models identifies a conserved highly plastic basal cell state KL Pitter, O Grbovic-Huezo, S Joost, A Singhal, M Blum, K Wu, M Holm, ... Cancer research 82 (19), 3549-3560, 2022 | 15 | 2022 |
| SKP2 Knockout in Rb1/p53–Deficient Mouse Models of Osteosarcoma Induces Immune Infiltration and Drives a Transcriptional Program with a Favorable Prognosis A Ferrena, J Wang, R Zhang, B Karadal-Ferrena, W Al-Hardan, S Singh, ... Molecular cancer therapeutics 23 (2), 223-234, 2024 | 7 | 2024 |
| Targeted inhibition of SCFSKP2 confers anti-tumor activities resulting in a survival benefit in osteosarcoma J Wang, A Ferrena, R Zhang, S Singh, V Viscarret, W Al-Harden, ... Oncogene 43 (13), 962-975, 2024 | 5 | 2024 |
| Ageing limits stemness and tumorigenesis by reprogramming iron homeostasis X Zhuang, Q Wang, S Joost, A Ferrena, DT Humphreys, Z Li, M Blum, ... Nature 637 (8044), 184-194, 2025 | 3 | 2025 |
| Targeting SKP2 by p27 Inhibits stemness and prolong the survival in osteosarcoma J Wang, O Aldahamsheh, A Ferrena, S Singh, A Singla, H Borjihan, ... Cancer Research 81 (13_Supplement), 2008-2008, 2021 | 2 | 2021 |
| Aging limits stemness and tumorigenesis in the lung by reprogramming iron homeostasis X Zhuang, Q Wang, S Joost, A Ferrena, DT Humphreys, Z Li, M Blum, ... BioRxiv, 2024.06. 23.600305, 2024 | 1 | 2024 |
| scDAPP: a comprehensive single-cell transcriptomics analysis pipeline optimized for cross-group comparison A Ferrena, XY Zheng, K Jackson, B Hoang, BE Morrow, D Zheng NAR Genomics and Bioinformatics 6 (4), lqae134, 2024 | | 2024 |
| Abstract A015: Aging limits stemness and tumor development in the lung by reprogramming iron homeostasis X Zhuang, Q Wang, S Joost, A Ferrena, M Blum, K Krause, Z Li, D Zheng, ... Cancer Research 84 (22_Supplement), A015-A015, 2024 | | 2024 |
| Six3 and Six6 jointly control diverse target genes in multiple cell populations over developmental trajectories of mouse embryonic retinal progenitor cells A Ferrena, X Zhang, R Shrestha, D Zheng, W Liu Plos one 19 (10), e0308839, 2024 | | 2024 |
| The evolution of the multidisciplinary tumor board in orthopedic oncology: from its historical roots to its future potential B Goker, M Shea, R Zhang, J Wang, A Ferrena, SS Chae, H Borjihan, ... Holistic Integrative Oncology 3 (1), 36, 2024 | | 2024 |
| Novel candidate metastasis‐associated genes for synovial sarcoma Z Zhao, J Niu, J Wang, R Zhang, H Liang, Y Ma, A Ferrena, W Wang, ... Journal of Cellular and Molecular Medicine 28 (14), e18541, 2024 | | 2024 |
| Six3 and Six6 jointly control diverse target genes to regulate cell states over developmental trajectories of mouse embryonic retinal progenitor cells W Liu, A Ferrena, X Zhang, R Shrestha, D Zheng Investigative Ophthalmology & Visual Science 65 (7), 6688-6688, 2024 | | 2024 |
| Comprehensive single cell transcriptomics analysis of murine osteosarcoma uncovers Skp2 function in metastasis, genomic instability and immune activation and reveals additional … A Ferrena, R Zhang, J Wang, XY Zheng, B Göker, H Borjihan, SS Chae, ... bioRxiv, 2024 | | 2024 |
| Molecular and Clinical Implications of SKP2 Inhibition in Osteosarcoma A Ferrena Albert Einstein College of Medicine, 2024 | | 2024 |
| Facilitate integrated analysis of single cell multiomic data by binarizing gene expression values R Misra, A Ferrena, D Zheng bioRxiv, 2024.02. 22.581665, 2024 | | 2024 |
| Six3 and Six6 jointly regulate the identities and developmental trajectories of multipotent retinal progenitor cells in the mouse retina A Ferrena, X Zhang, R Shrestha, D Zheng, W Liu bioRxiv, 2023.05. 03.539288, 2023 | | 2023 |
| SKP2 knockout induces macrophage infiltration in p53/Rb1 null transgenic mouse models of osteosarcoma and drives gene expression correlated with improved survival in patients A Ferrena, J Wang, R Zhang, R Yang, D Geller, B Hoang, D Zheng Cancer Research 83 (7_Supplement), 553-553, 2023 | | 2023 |
| Targeted inhibition of the E3 ligase SCFSkp2/Cks1 has survival benefit and antitumor activity in osteosarcoma J Wang, A Ferrena, R Zhang, S Singh, H Zhao, D Zheng, H Borjihan, ... Cancer Research 82 (12_Supplement), 6188-6188, 2022 | | 2022 |