Pangenomic analysis identifies structural variation associated with heat tolerance in pearl millet H Yan, M Sun, Z Zhang, Y Jin, A Zhang, C Lin, B Wu, M He, B Xu, J Wang, ... Nature Genetics 55 (3), 507-518, 2023 | 102 | 2023 |
Genetic and Genomic Tools for Cannabis sativa D Vergara, H Baker, K Clancy, KG Keepers, JP Mendieta, CS Pauli, ... Critical Reviews in Plant Sciences 35 (5-6), 364-377, 2016 | 74 | 2016 |
Genetics of alternative splicing evolution during sunflower domestication CCR Smith, S Tittes, JP Mendieta, E Collier-Zans, HC Rowe, ... Proceedings of the National Academy of Sciences 115 (26), 6768-6773, 2018 | 48 | 2018 |
Simple and accurate transcriptional start site identification using Smar2C2 and examination of conserved promoter features A Murray, JP Mendieta, C Vollmers, RJ Schmitz The Plant Journal 112 (2), 583-596, 2022 | 14 | 2022 |
Leveraging histone modifications to improve genome annotations JP Mendieta, AP Marand, WA Ricci, X Zhang, RJ Schmitz G3 11 (10), jkab263, 2021 | 10 | 2021 |
Evolution of plant cell-type-specific cis-regulatory elements H Yan, JP Mendieta, X Zhang, AP Marand, Y Liang, Z Luo, MAA Minow, ... bioRxiv, 2024.01. 08.574753, 2024 | 6 | 2024 |
A spatially resolved multi-omic single-cell atlas of soybean development X Zhang, Z Luo, AP Marand, H Yan, H Jang, S Bang, JP Mendieta, ... Cell 188 (2), 550-567. e19, 2025 | 5 | 2025 |
Investigating the cis-Regulatory Basis of C3 and C4 Photosynthesis in Grasses at Single-Cell Resolution JP Mendieta, X Tu, D Jiang, H Yan, X Zhang, AP Marand, S Zhong, ... bioRxiv, 2024 | 5 | 2024 |
Exploring plant cis‐regulatory elements at single‐cell resolution: overcoming biological and computational challenges to advance plant research JP Mendieta, A Sangra, H Yan, MAA Minow, RJ Schmitz The Plant Journal 115 (6), 1486-1499, 2023 | 5 | 2023 |
The genetic architecture of cell-type-specific cis-regulation in maize AP Marand, L Jiang, F Gomez-Cano, MAA Minow, X Zhang, JP Mendieta, ... bioRxiv, 2024.08. 17.608383, 2024 | | 2024 |
Evolution of cell-type-specific accessible chromatin regions and thecis-regulatory elements that drive lineage-specific innovation H Yan, JP Mendieta, X Zhang, AP Marand, Y Liang, Z Luo, T Roulé, ... | | 2024 |