| Sketching algorithms for genomic data analysis and querying in a secure enclave C Kockan, K Zhu, N Dokmai, N Karpov, MO Kulekci, DP Woodruff, ... Nature methods 17 (3), 295-301, 2020 | 68 | 2020 |
| SiNVICT: ultra-sensitive detection of single nucleotide variants and indels in circulating tumour DNA C Kockan, F Hach, I Sarrafi, RH Bell, B McConeghy, K Beja, A Haegert, ... Bioinformatics 33 (1), 26-34, 2017 | 65 | 2017 |
| Privacy-preserving genotype imputation in a trusted execution environment N Dokmai, C Kockan, K Zhu, XF Wang, SC Sahinalp, H Cho Cell systems 12 (10), 983-993. e7, 2021 | 40 | 2021 |
| Toolkit for automated and rapid discovery of structural variants A Soylev, C Kockan, F Hormozdiari, C Alkan Methods 129, 3-7, 2017 | 34 | 2017 |
| Structural variation and fusion detection using targeted sequencing data from circulating cell free DNA AR Gawroński, YY Lin, B McConeghy, S LeBihan, H Asghari, C Koçkan, ... Nucleic acids research 47 (7), e38-e38, 2019 | 25 | 2019 |
| Homomorphic Encryption: An Application to Polygenic Risk Scores E Knight, J Li, M Jensen, I Yolou, C Kockan, M Gerstein bioRxiv, 2024.05. 26.595961, 2024 | 1 | 2024 |
| Privacy-Preserving Algorithms for Secure Genome Analysis in Trusted Execution Environments C Kockan Indiana University, 2021 | 1 | 2021 |
| Learning-Augmented Sketching Offers Improved Performance for Privacy Preserving and Secure GWAS J Xu, K Zhu, J Cai, C Kockan, N Dokmai, H Cho, DP Woodruff, ... bioRxiv, 2024 | | 2024 |
| Homomorphic Encryption: An Application to Polygenic Risk Scores J Li, M Jensen, I Yolou, C Kockan, M Gerstein | | 2024 |
| Genomic Privacy: Advocating for the Convergence of Legal and Technical Solutions C Kockan, D Greenbaum, D Lee, M Gerstein Georgetown Journal of International Affairs 23 (2), 246-253, 2022 | | 2022 |
| Methods for the Detection of Single Nucleotide Variants and Indels from Cell-Free DNA C Kockan Simon Fraser University, 2016 | | 2016 |
S. Cenk SahinalpSenior Investigator, Cancer Data Science Lab, National Cancer Institute, NIHVerified email at nih.gov