| Modular assembly of dynamic models in systems biology M Pan, PJ Gawthrop, J Cursons, EJ Crampin PLoS computational biology 17 (10), e1009513, 2021 | 31 | 2021 |
| A thermodynamic framework for modelling membrane transporters M Pan, PJ Gawthrop, K Tran, J Cursons, EJ Crampin Biophysical Journal 116 (3), 420a, 2019 | 27 | 2019 |
| Bond graph modelling of the cardiac action potential: implications for drift and non-unique steady states M Pan, PJ Gawthrop, K Tran, J Cursons, EJ Crampin Proceedings of the Royal Society A: Mathematical, Physical and Engineering …, 2018 | 27 | 2018 |
| Hierarchical semantic composition of biosimulation models using bond graphs N Shahidi, M Pan, S Safaei, K Tran, EJ Crampin, DP Nickerson PLoS computational biology 17 (5), e1008859, 2021 | 17 | 2021 |
| Analysing and simulating energy-based models in biology using BondGraphTools P Cudmore, M Pan, PJ Gawthrop, EJ Crampin The European Physical Journal E 44, 1-20, 2021 | 16 | 2021 |
| Modular dynamic biomolecular modelling with bond graphs: the unification of stoichiometry, thermodynamics, kinetics and data PJ Gawthrop, M Pan, EJ Crampin Journal of the Royal Society Interface 18 (181), 20210478, 2021 | 14 | 2021 |
| The cell physiome: what do we need in a computational physiology framework for predicting single-cell biology? V Rajagopal, S Arumugam, PJ Hunter, A Khadangi, J Chung, M Pan Annual Review of Biomedical Data Science 5 (1), 341-366, 2022 | 13 | 2022 |
| Network thermodynamical modeling of bioelectrical systems: a bond graph approach PJ Gawthrop, M Pan Bioelectricity 3 (1), 3-13, 2021 | 12 | 2021 |
| Network thermodynamics of biological systems: A bond graph approach PJ Gawthrop, M Pan Mathematical Biosciences 352, 108899, 2022 | 11 | 2022 |
| When push comes to shove: Exclusion processes with nonlocal consequences AA Almet, M Pan, BD Hughes, KA Landman Physica A: Statistical Mechanics and its Applications 437, 119-129, 2015 | 10 | 2015 |
| The cardiac Na/K ATPase: An updated, thermodynamically consistent model M Pan, PJ Gawthrop, J Cursons, K Tran, EJ Crampin arXiv preprint arXiv:1711.00989, 2017 | 9 | 2017 |
| Energy dependence of signalling dynamics and robustness in bacterial two component systems J Forrest, M Pan, EJ Crampin, V Rajagopal, MPH Stumpf bioRxiv, 2023.02. 12.528212, 2023 | 6 | 2023 |
| A semantics, energy-based approach to automate biomodel composition N Shahidi, M Pan, K Tran, EJ Crampin, DP Nickerson PloS one 17 (6), e0269497, 2022 | 6 | 2022 |
| Computer-aided modelling of complex physical systems with BondGraphTools P Cudmore, PJ Gawthrop, M Pan, EJ Crampin arXiv preprint arXiv:1906.10799, 2019 | 5 | 2019 |
| A bond graph approach to integrative biophysical modelling. M Pan University of Melbourne, Parkville, Victoria, Australia, 2019 | 5 | 2019 |
| Energy-based advection modelling using bond graphs PJ Gawthrop, M Pan Journal of The Royal Society Interface 19 (195), 20220492, 2022 | 4 | 2022 |
| BondGraphs. jl: composable energy-based modelling in systems biology J Forrest, V Rajagopal, MPH Stumpf, M Pan Bioinformatics 39 (10), btad578, 2023 | 3 | 2023 |
| SBML to bond graphs: from conversion to composition N Shahidi, M Pan, K Tran, EJ Crampin, DP Nickerson Mathematical Biosciences 352, 108901, 2022 | 3 | 2022 |
| A review of the diverse applications of bond graphs in biology and physiology M Akbarpour Ghazani, M Pan, K Tran, A Rampadarath, DP Nickerson Proceedings of the Royal Society A 480 (2294), 20230807, 2024 | 1 | 2024 |
| Frontiers of Mathematical Biology: A workshop honouring Professor Edmund Crampin R Araujo, D Brumley, J Cursons, K Day, M Faria, JA Flegg, D Germano, ... Mathematical Biosciences 359, 2023 | 1 | 2023 |
