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German Plata
German Plata
Adjunct Associate Research Scientist, Columbia University
Verified email at columbia.edu
Title
Cited by
Cited by
Year
Reconstruction and flux‐balance analysis of the Plasmodium falciparum metabolic network
G Plata, TL Hsiao, KL Olszewski, M Llinás, D Vitkup
Molecular systems biology 6 (1), 408, 2010
1692010
Sequencing analysis of 20,000 full-length cDNA clones from cassava reveals lineage specific expansions in gene families related to stress response
T Sakurai, G Plata, F Rodríguez-Zapata, M Seki, A Salcedo, A Toyoda, ...
BMC Plant Biology 7, 1-17, 2007
1322007
Long-term phenotypic evolution of bacteria
G Plata, CS Henry, D Vitkup
Nature 517 (7534), 369-372, 2015
872015
Global probabilistic annotation of metabolic networks enables enzyme discovery
G Plata, T Fuhrer, TL Hsiao, U Sauer, D Vitkup
Nature Chemical Biology, 2012
712012
The COMBREX project: design, methodology, and initial results
BP Anton, YC Chang, P Brown, HP Choi, LL Faller, J Guleria, Z Hu, ...
PLoS biology 11 (8), e1001638, 2013
692013
Identification of cassava microRNAs under abiotic stress
C Ballén-Taborda, G Plata, S Ayling, F Rodríguez-Zapata, ...
International journal of genomics 2013 (1), 857986, 2013
612013
Growth promotion and antibiotic induced metabolic shifts in the chicken gut microbiome
G Plata, NT Baxter, D Susanti, A Volland-Munson, D Gangaiah, ...
Communications Biology 5 (1), 293, 2022
592022
Genetic robustness and functional evolution of gene duplicates
G Plata, D Vitkup
Nucleic acids research 42 (4), 2405-2414, 2014
512014
The rate of the molecular clock and the cost of gratuitous protein synthesis
G Plata, ME Gottesman, D Vitkup
Genome biology 11, 1-10, 2010
422010
Two novel DNAs that enhance symptoms and overcome CMD2 resistance to cassava mosaic disease
J Ndunguru, L De León, CD Doyle, P Sseruwagi, G Plata, JP Legg, ...
Journal of virology 90 (8), 4160-4173, 2016
412016
Molecular function limits divergent protein evolution on planetary timescales
MM Konate, G Plata, J Park, DR Usmanova, H Wang, D Vitkup
Elife 8, e39705, 2019
302019
Protein stability and avoidance of toxic misfolding do not explain the sequence constraints of highly expressed proteins
G Plata, D Vitkup
Molecular biology and evolution 35 (3), 700-703, 2018
262018
Multi-Omics Characterization of Host-Derived Bacillus spp. Probiotics for Improved Growth Performance in Poultry
D Susanti, A Volland, N Tawari, N Baxter, D Gangaiah, G Plata, ...
Frontiers in Microbiology 12, 747845, 2021
192021
The relationship between the misfolding avoidance hypothesis and protein evolutionary rates in the light of empirical evidence
DR Usmanova, G Plata, D Vitkup
Genome Biology and Evolution 13 (2), evab006, 2021
152021
SiGMoiD: A super-statistical generative model for binary data
X Zhao, G Plata, PD Dixit
PLoS Computational Biology 17 (8), e1009275, 2021
142021
Sequences enhancing cassava mosaic disease symptoms occur in the cassava genome and are associated with South African cassava mosaic virus infection
AT Maredza, F Allie, G Plata, MEC Rey
Molecular Genetics and Genomics 291, 1467-1485, 2016
142016
In silico, in vitro and in vivo characterization of host-associated Latilactobacillus curvatus strains for potential probiotic applications in farmed Atlantic salmon (Salmo salar)
HS Cathers, SP Mane, NR Tawari, J Balakuntla, G Plata, M Krishnamurthy, ...
Scientific Reports 12 (1), 18417, 2022
102022
Designing host-associated microbiomes using the consumer/resource model
G Plata, K Srinivasan, M Krishnamurthy, L Herron, P Dixit
mSystems, e01068-24, 2024
22024
Functional optimization in distinct tissues and conditions constrains the rate of protein evolution
DR Usmanova, G Plata, D Vitkup
Molecular Biology and Evolution 41 (10), msae200, 2024
22024
Effects of Limosilactobacillus reuteri strains PTA-126787 and PTA-126788 on intestinal barrier integrity and immune homeostasis in an alcohol-induced leaky gut …
D Gangaiah, M Gu, A Zaparte, O Will, LC Dolan, A Goering, J Pillai, ...
Scientific Reports 14 (1), 19584, 2024
22024
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