Follow
Simon Valentin Mathis
Title
Cited by
Cited by
Year
Artificial intelligence for science in quantum, atomistic, and continuum systems
X Zhang, L Wang, J Helwig, Y Luo, C Fu, Y Xie, M Liu, Y Lin, Z Xu, K Yan, ...
arXiv preprint arXiv:2307.08423, 2023
1192023
On the expressive power of geometric graph neural networks
CK Joshi, C Bodnar, SV Mathis, T Cohen, P Lio
International conference on machine learning, 15330-15355, 2023
982023
Toward scalable simulations of lattice gauge theories on quantum computers
SV Mathis, G Mazzola, I Tavernelli
Physical Review D 102 (9), 094501, 2020
762020
A Hitchhiker's Guide to Geometric GNNs for 3D Atomic Systems
A Duval, SV Mathis, CK Joshi, V Schmidt, S Miret, FD Malliaros, T Cohen, ...
arXiv preprint arXiv:2312.07511, 2023
592023
Posecheck: Generative models for 3d structure-based drug design produce unrealistic poses
C Harris, K Didi, A Jamasb, C Joshi, S Mathis, P Lio, T Blundell
NeurIPS 2023 Generative AI and Biology (GenBio) Workshop, 2023
46*2023
Gauge-invariant quantum circuits for (1) and Yang-Mills lattice gauge theories
G Mazzola, SV Mathis, G Mazzola, I Tavernelli
Physical review research 3 (4), 043209, 2021
382021
gRNAde: Geometric Deep Learning for 3D RNA inverse design
CK Joshi, AR Jamasb, R Viñas, C Harris, S Mathis, A Morehead, R Anand, ...
bioRxiv, 2024
16*2024
A framework for conditional diffusion modelling with applications in motif scaffolding for protein design
K Didi, F Vargas, SV Mathis, V Dutordoir, E Mathieu, UJ Komorowska, ...
arXiv preprint arXiv:2312.09236, 2023
132023
Diffhopp: A graph diffusion model for novel drug design via scaffold hopping
J Torge, C Harris, SV Mathis, P Lio
arXiv preprint arXiv:2308.07416, 2023
92023
DEFT: Efficient Fine-tuning of Diffusion Models by Learning the Generalised h-transform
A Denker, F Vargas, S Padhy, K Didi, SV Mathis, R Barbano, V Dutordoir, ...
NeurIPS, 2024
8*2024
Evaluating representation learning on the protein structure universe
AR Jamasb, A Morehead, CK Joshi, Z Zhang, K Didi, S Mathis, C Harris, ...
ArXiv, arXiv: 2406.13864 v1, 2024
82024
Computational tools for assessing forest recovery with GEDI shots and forest change maps
A Holcomb, SV Mathis, DA Coomes, S Keshav
Science of Remote Sensing 8, 100106, 2023
82023
Dynamics-Informed Protein Design with Structure Conditioning
UJ Komorowska, SV Mathis, K Didi, F Vargas, P Lio, M Jamnik
The Twelfth International Conference on Learning Representations, 2023
7*2023
Rna-frameflow for de novo 3d rna backbone design
R Anand, CK Joshi, A Morehead, AR Jamasb, C Harris, SV Mathis, K Didi, ...
ICML 2024 Workshop on Structured Probabilistic Inference {\&} Generative …, 2024
4*2024
Microdroplet screening rapidly profiles a biocatalyst to enable its AI-assisted engineering
M Gantz, SV Mathis, FEH Nintzel, PJ Zurek, T Knaus, E Patel, D Boros, ...
bioRxiv, 2024.04. 08.588565, 2024
32024
On synergy between ultrahigh throughput screening and machine learning in biocatalyst engineering
M Gantz, SV Mathis, FEH Nintzel, P Lio, F Hollfelder
Faraday Discussions 252, 89-114, 2024
32024
Thought experiments in a quantum computer
N Nurgalieva, S Mathis, L del Rio, R Renner
arXiv preprint arXiv:2209.06236, 2022
32022
Improving Antibody Design with Force-Guided Sampling in Diffusion Models
P Kulytė, F Vargas, SV Mathis, YG Wang, JM Hernández-Lobato, P Liò
arXiv preprint arXiv:2406.05832, 2024
22024
Predicting protein variants with equivariant graph neural networks
A Boca, S Mathis
arXiv preprint arXiv:2306.12231, 2023
22023
Evaluating Zero-Shot Scoring for In Vitro Antibody Binding Prediction with Experimental Validation
D Nori, SV Mathis, A Shanehsazzadeh
arXiv preprint arXiv:2312.05273, 2023
2023
The system can't perform the operation now. Try again later.
Articles 1–20