CTCF loss has limited effects on global genome architecture in Drosophila despite critical regulatory functions A Kaushal, G Mohana, J Dorier, I Özdemir, A Omer, P Cousin, ... Nature communications 12 (1), 1011, 2021 | 87 | 2021 |
Chromatin alternates between A and B compartments at kilobase scale for subgenic organization HL Harris, H Gu, M Olshansky, A Wang, I Farabella, Y Eliaz, A Kalluchi, ... Nature communications 14 (1), 3303, 2023 | 76 | 2023 |
The ENCODE uniform analysis pipelines BC Hitz, L Jin-Wook, O Jolanki, MS Kagda, K Graham, P Sud, I Gabdank, ... Biorxiv, 2023 | 63 | 2023 |
Drug-induced PD-L1 expression and cell stress response in breast cancer cells can be balanced by drug combination Y Gilad, Y Eliaz, Y Yu, SJ Han, BW O’Malley, DM Lonard Scientific reports 9 (1), 15099, 2019 | 54 | 2019 |
The role of the Arp2/3 complex in shaping the dynamics and structures of branched actomyosin networks J Liman, C Bueno, Y Eliaz, NP Schafer, MN Waxham, PG Wolynes, ... Proceedings of the National Academy of Sciences 117 (20), 10825-10831, 2020 | 32 | 2020 |
Fine-mapping of nuclear compartments using ultra-deep Hi-C shows that active promoter and enhancer elements localize in the active A compartment even when adjacent sequences do not H Gu, H Harris, M Olshansky, Y Eliaz, A Krishna, A Kalluchi, M Jacobs, ... BioRxiv, 2021.10. 03.462599, 2021 | 29 | 2021 |
Impact of hydrodynamic interactions on protein folding rates depends on temperature FC Zegarra, D Homouz, Y Eliaz, AG Gasic, MS Cheung Physical Review E 97 (3), 032402, 2018 | 15 | 2018 |
A genome-scale CRISPR Cas9 dropout screen identifies synthetically lethal targets in SRC-3 inhibited cancer cells Y Gilad, Y Eliaz, Y Yu, AM Dean, SJ Han, L Qin, BW O’Malley, DM Lonard Communications Biology 4 (1), 399, 2021 | 12 | 2021 |
Insights from graph theory on the morphologies of actomyosin networks with multilinkers Y Eliaz, F Nedelec, G Morrison, H Levine, MS Cheung Physical Review E 102 (6), 062420, 2020 | 10 | 2020 |
Cooperation among an anonymous group protected Bitcoin during failures of decentralization A Blackburn, C Huber, Y Eliaz, MS Shamim, D Weisz, G Seshadri, K Kim, ... arXiv preprint arXiv:2206.02871, 2022 | 8 | 2022 |
Poolkeh finds the optimal pooling strategy for a population-wide COVID-19 testing (Israel, UK, and US as test cases) Y Eliaz, M Danovich, GP Gasic MedRxiv, 2020.04. 25.20079343, 2020 | 5 | 2020 |
Is Hydroydrodynamic Interaction Important to Protein Folding? DM Homouz, FC Zegarra, Y Eliaz, MS Cheung Biophysical Journal 114 (3), 52a, 2018 | 5 | 2018 |
Forecasting avalanches in branched actomyosin networks with network science and Machine learning C Li, J Liman, Y Eliaz, MS Cheung The Journal of Physical Chemistry B 125 (42), 11591-11605, 2021 | 4 | 2021 |
Author correction: drug-induced PD-L1 expression and cell stress response in breast cancer cells can be balanced by drug combination Y Gilad, Y Eliaz, Y Yu, SJ Han, BW O’Malley, DM Lonard Scientific Reports 10, 2020 | 2 | 2020 |
Insights from graph theory on the morphologies of actomyosin networks with multilinkers Y Eliaz, F Nedelec, G Morrison, H Levine, MS Cheung Biophysical Journal 120 (3), 160a, 2021 | 1 | 2021 |
Multivalent actin-binding proteins augment the variety of morphologies in actomyosin networks Y Eliaz, F Nedelec, G Morrison, H Levine, MS Cheung arXiv preprint arXiv:2006.06503, 2020 | 1 | 2020 |
Poolkeh finds the optimal pooling strategy for a populationwide COVID-19 testing Y Eliaz, M Danovich, P Amey, GP Gasic Preprint at, 2020 | 1 | 2020 |
Graph-based ginzburg-landau energy functional theory for soft matter Y Eliaz, M Cheung Bulletin of the American Physical Society 63, 2018 | 1 | 2018 |
CaXML: Chemistry‐informed machine learning explains mutual changes between protein conformations and calcium ions in calcium‐binding proteins using … P Zhang, J Nde, Y Eliaz, N Jennings, P Cieplak, MS Cheung Protein Science 34 (2), e70023, 2025 | | 2025 |
Chemistry-informed Machine Learning Explains Calcium-binding Proteins’ Fuzzy Shape for Communicating Changes in the Atomic States of Calcium Ions P Zhang, J Nde, Y Eliaz, N Jennings, P Cieplak, MS Cheung ArXiv, arXiv: 2407.17017 v1, 2024 | | 2024 |