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Andrew S. Earl
Andrew S. Earl
PhD Candidate, Harvard University
Verified email at g.harvard.edu
Title
Cited by
Cited by
Year
Chromatin potential identified by shared single-cell profiling of RNA and chromatin
S Ma, B Zhang, LM LaFave, AS Earl, Z Chiang, Y Hu, J Ding, A Brack, ...
Cell 183 (4), 1103-1116. e20, 2020
8352020
In situ genome sequencing resolves DNA sequence and structure in intact biological samples
AC Payne, ZD Chiang, PL Reginato, SM Mangiameli, EM Murray, CC Yao, ...
Science 371 (6532), eaay3446, 2021
1982021
Spatial genomics enables multi-modal study of clonal heterogeneity in tissues
T Zhao, ZD Chiang, JW Morriss, LM LaFave, EM Murray, I Del Priore, ...
Nature 601 (7891), 85-91, 2022
1872022
Functional inference of gene regulation using single-cell multi-omics
VK Kartha, FM Duarte, Y Hu, S Ma, JG Chew, CA Lareau, A Earl, ...
Cell genomics 2 (9), 2022
1442022
Epigenetic memory of coronavirus infection in innate immune cells and their progenitors
JG Cheong, A Ravishankar, S Sharma, CN Parkhurst, SA Grassmann, ...
Cell 186 (18), 3882-3902. e24, 2023
1172023
N6-adenosine methylation of ribosomal RNA affects lipid oxidation and stress resistance
N Liberman, ZK O’Brown, AS Earl, K Boulias, MV Gerashchenko, ...
Science advances 6 (17), eaaz4370, 2020
542020
Androgen signaling is essential for development of prostate cancer initiated from prostatic basal cells
Y He, E Hooker, EJ Yu, GR Cunha, L Liao, J Xu, A Earl, H Wu, ...
Oncogene 38 (13), 2337-2350, 2019
222019
Single-cell multi-scale footprinting reveals the modular organization of DNA regulatory elements
Y Hu, S Ma, VK Kartha, FM Duarte, M Horlbeck, R Zhang, R Shrestha, ...
bioRxiv, 2023
152023
Photoselective sequencing: microscopically guided genomic measurements with subcellular resolution
SM Mangiameli, H Chen, AS Earl, JA Dobkin, D Lesman, JD Buenrostro, ...
Nature methods 20 (5), 686-694, 2023
82023
Cell of origin epigenetic priming determines susceptibility to Tet2 mutation
G Schiroli, V Kartha, FM Duarte, TA Kristiansen, C Mayerhofer, ...
Nature Communications 15 (1), 4325, 2024
22024
Expansion in situ genome sequencing links nuclear abnormalities to hotspots of aberrant euchromatin repression
AS Labade, ZD Chiang, C Comenho, PL Reginato, AC Payne, AS Earl, ...
bioRxiv, 2024
22024
Proximal-end bias from in-vitro reconstituted nucleosomes and the result on downstream data analysis
DA Bates, CE Bates, AS Earl, C Skousen, AN Fetbrandt, J Ritchie, ...
Plos one 16 (10), e0258737, 2021
22021
Multiscale footprints reveal the organization of cis-regulatory elements
Y Hu, MA Horlbeck, R Zhang, S Ma, R Shrestha, VK Kartha, FM Duarte, ...
Nature, 1-8, 2025
2025
Androgen signaling is essential for prostate cancer development initiated from prostatic basal cells
Y He, E Hooker, EJ Yu, GR Cunha, L Liao, J Xu, A Earl, H Wu, ...
Cancer Research 79 (13_Supplement), 4607-4607, 2019
2019
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