| RNA velocity unraveled G Gorin, M Fang, T Chari, L Pachter PLOS Computational Biology 18 (9), e1010492, 2022 | 133 | 2022 |
| Protein velocity and acceleration from single-cell multiomics experiments G Gorin, V Svensson, L Pachter Genome biology 21, 1-6, 2020 | 85 | 2020 |
| Interpretable and tractable models of transcriptional noise for the rational design of single-molecule quantification experiments G Gorin, JJ Vastola, M Fang, L Pachter Nature Communications 13, 7620, 2022 | 46 | 2022 |
| Length biases in single-cell RNA sequencing of pre-mRNA G Gorin, L Pachter Biophysical Reports 3 (1), 2023 | 33 | 2023 |
| Modeling bursty transcription and splicing with the chemical master equation G Gorin, L Pachter Biophysical Journal 121 (6), 1056-1069, 2022 | 32 | 2022 |
| Studying stochastic systems biology of the cell with single-cell genomics data G Gorin, JJ Vastola, L Pachter Cell Systems 14 (10), 822-843. e22, 2023 | 25 | 2023 |
| Special function methods for bursty models of transcription G Gorin, L Pachter Physical Review E 102 (2), 022409, 2020 | 24 | 2020 |
| Biophysical modeling with variational autoencoders for bimodal, single-cell RNA sequencing data M Carilli, G Gorin, Y Choi, T Chari, L Pachter Nature Methods 21 (8), 1466-1469, 2024 | 16 | 2024 |
| Spectral neural approximations for models of transcriptional dynamics G Gorin, M Carilli, T Chari, L Pachter Biophysical Journal 123 (17), 2892-2901, 2024 | 15 | 2024 |
| Monod: mechanistic analysis of single-cell RNA sequencing count data G Gorin, L Pachter bioRxiv, 2022.06. 11.495771, 2022 | 14 | 2022 |
| Stochastic simulation and statistical inference platform for visualization and estimation of transcriptional kinetics G Gorin, M Wang, I Golding, H Xu Plos one 15 (3), e0230736, 2020 | 14 | 2020 |
| Intrinsic and extrinsic noise are distinguishable in a synthesis–export–degradation model of mRNA production G Gorin, L Pachter bioRxiv, 2020.09. 25.312868, 2020 | 13 | 2020 |
| Distinguishing biophysical stochasticity from technical noise in single-cell RNA sequencing using Monod G Gorin, L Pachter bioRxiv, 2022.06. 11.495771, 2022 | 11 | 2022 |
| Analytic solution of chemical master equations involving gene switching. I: Representation theory and diagrammatic approach to exact solution JJ Vastola, G Gorin, L Pachter, WR Holmes arXiv preprint arXiv:2103.10992, 2021 | 10 | 2021 |
| Transient and delay chemical master equations G Gorin, S Yoshida, L Pachter bioRxiv, 2022.10. 17.512599, 2022 | 8 | 2022 |
| Biophysically interpretable inference of cell types from multimodal sequencing data T Chari, G Gorin, L Pachter Nature Computational Science 4 (9), 677-689, 2024 | 6 | 2024 |
| Assessing markovian and delay models for single-nucleus RNA sequencing G Gorin, S Yoshida, L Pachter Bulletin of Mathematical Biology 85 (11), 114, 2023 | 6 | 2023 |
| A Biophysical Model for ATAC-seq Data Analysis C Felce, G Gorin, L Pachter bioRxiv, 2024.01. 25.577262, 2024 | 3 | 2024 |
| Trajectory inference from single-cell genomics data with a process time model M Fang, G Gorin, L Pachter PLOS Computational Biology 21 (1), e1012752, 2025 | 2 | 2025 |
| New and notable: Revisiting the “two cultures” through extrinsic noise G Gorin, L Pachter Biophysical Journal 123 (1), 1-3, 2024 | 1 | 2024 |
Lior PachterBren Professor of Computational Biology, CaltechVerified email at caltech.edu