| SCANPY: large-scale single-cell gene expression data analysis FA Wolf, P Angerer, FJ Theis Genome biology 19, 1-5, 2018 | 6162 | 2018 |
| destiny: diffusion maps for large-scale single-cell data in R P Angerer, L Haghverdi, M Büttner, FJ Theis, C Marr, F Buettner Bioinformatics 32 (8), 1241-1243, 2016 | 604 | 2016 |
| LocTree3 prediction of localization T Goldberg, M Hecht, T Hamp, T Karl, G Yachdav, N Ahmed, U Altermann, ... Nucleic acids research 42 (W1), W350-W355, 2014 | 345 | 2014 |
| Single cells make big data: new challenges and opportunities in transcriptomics P Angerer, L Simon, S Tritschler, FA Wolf, D Fischer, FJ Theis Current opinion in systems biology 4, 85-91, 2017 | 228 | 2017 |
| anndata: Annotated data I Virshup, S Rybakov, FJ Theis, P Angerer, FA Wolf BioRxiv, 2021.12. 16.473007, 2021 | 176 | 2021 |
| BART-Seq: cost-effective massively parallelized targeted sequencing for genomics, transcriptomics, and single-cell analysis F Uzbas, F Opperer, C Sönmezer, D Shaposhnikov, S Sass, C Krendl, ... Genome biology 20 (1), 1-16, 2019 | 23 | 2019 |
| anndata: Access and store annotated data matrices I Virshup, S Rybakov, FJ Theis, P Angerer, FA Wolf Journal of Open Source Software 9 (101), 4371, 2024 | 16 | 2024 |
| Automatic identification of relevant genes from low-dimensional embeddings of single-cell RNA-seq data P Angerer, DS Fischer, FJ Theis, A Scialdone, C Marr Bioinformatics 36 (15), 4291-4295, 2020 | 14 | 2020 |
| FASTGenomics: An analytical ecosystem for single-cell RNA sequencing data CJ Scholz, P Biernat, M Becker, K Baßler, P Günther, J Balfer, H Dickten, ... bioRxiv, 272476, 2018 | 12 | 2018 |
| Scanpy for analysis of large-scale single-cell gene expression data FA Wolf, P Angerer, FJ Theis bioRxiv, 174029, 2017 | 12 | 2017 |
| Scanpy for large-scale single-cell analysis FA Wolf, P Angerer, L Simon, FJ Theis | 2 | 2017 |
| MetaMap, an interactive webtool for the exploration of metatranscriptomic reads in human disease-related RNA-seq data LM Simon, G Tsitsiridis, P Angerer, FJ Theis bioRxiv, 425439, 2018 | 1 | 2018 |
| destiny P Angerer, L Haghverdi, M Büttner, FJ Theis, C Marr, F Buettner, ... | | |
Fabian J TheisHelmholtz Munich, Technical University of MunichVerified email at helmholtz-muenchen.de