| Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram T Biancalani, G Scalia, L Buffoni, R Avasthi, Z Lu, A Sanger, N Tokcan, ... Nature methods 18 (11), 1352-1362, 2021 | 533 | 2021 |
| Nik Bear Brown, Duccio Fanelli, Xiaowei Zhuang, Evan Z. Macosko, and Aviv Regev. Deep learning and alignment of spatially resolved single-cell transcriptomes with tangram T Biancalani, G Scalia, L Buffoni, R Avasthi, Z Lu, A Sanger, N Tokcan, ... Nature Methods 18 (11), 1352-1362, 2021 | 12 | 2021 |
| Genetic vulnerability to Crohn’s disease reveals a spatially resolved epithelial restitution program T Nakata, C Li, T Mayassi, H Lin, K Ghosh, Å Segerstolpe, EL Diamond, ... Science translational medicine 15 (719), eadg5252, 2023 | 3 | 2023 |
| A 3D-Shape Similarity-based Contrastive Approach to Molecular Representation Learning A Atsango, NL Diamant, Z Lu, T Biancalani, G Scalia, KV Chuang arXiv preprint arXiv:2211.02130, 2022 | 3 | 2022 |
| Cell morphology-guided small molecule generation with gflownets SZ Lu, Z Lu, E Hajiramezanali, T Biancalani, Y Bengio, G Scalia, ... ICML 2024 Workshop on Structured Probabilistic Inference {\&} Generative …, 2024 | 2 | 2024 |
| MolCap-Arena: A Comprehensive Captioning Benchmark on Language-Enhanced Molecular Property Prediction C Edwards, Z Lu, E Hajiramezanali, T Biancalani, H Ji, G Scalia arXiv preprint arXiv:2411.00737, 2024 | 1 | 2024 |
| Cell Morphology-Guided Small Molecule Generation with GFlowNets S Zhewen Lu, Z Lu, E Hajiramezanali, T Biancalani, Y Bengio, G Scalia, ... arXiv e-prints, arXiv: 2408.05196, 2024 | | 2024 |
| A high-throughput phenotypic screen combined with an ultra-large-scale deep learning-based virtual screening reveals novel scaffolds of antibacterial compounds G Scalia, ST Rutherford, Z Lu, KR Buchholz, N Skelton, K Chuang, ... bioRxiv, 2024.09. 11.612340, 2024 | | 2024 |
| Deep Fitness Inference for Drug Discovery with Directed Evolution NL Diamant, Z Lu, C Helmling, KV Chuang, C Cunningham, T Biancalani, ... NeurIPS 2022 Workshop on Learning Meaningful Representations of Life, 0 | | |
