| Harnessing genomics to fast-track genetic improvement in aquaculture RD Houston, TP Bean, DJ Macqueen, MK Gundappa, YH Jin, TL Jenkins, ... Nature Reviews Genetics 21 (7), 389-409, 2020 | 434 | 2020 |
| Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification FM Robertson, MK Gundappa, F Grammes, TR Hvidsten, AK Redmond, ... Genome biology 18, 1-14, 2017 | 173 | 2017 |
| The structural variation landscape in 492 Atlantic salmon genomes AC Bertolotti, RM Layer, MK Gundappa, MD Gallagher, E Pehlivanoglu, ... Nature Communications 11 (1), 5176, 2020 | 96 | 2020 |
| Comparative regulomics supports pervasive selection on gene dosage following whole genome duplication GB Gillard, L Grønvold, LL Røsæg, MM Holen, Ø Monsen, BF Koop, ... Genome Biology 22, 1-18, 2021 | 71* | 2021 |
| Genome-wide reconstruction of rediploidization following autopolyploidization across one hundred million years of salmonid evolution MK Gundappa, TH To, L Grønvold, SAM Martin, S Lien, J Geist, ... Molecular biology and evolution 39 (1), msab310, 2022 | 39 | 2022 |
| Independent rediploidization masks shared whole genome duplication in the sturgeon-paddlefish ancestor AK Redmond, D Casey, MK Gundappa, DJ Macqueen, A McLysaght Nature Communications 14 (1), 2879, 2023 | 35 | 2023 |
| Chromosome‐level reference genome for European flat oyster (Ostrea edulis L.) MK Gundappa, C Peñaloza, T Regan, I Boutet, A Tanguy, RD Houston, ... Evolutionary applications 15 (11), 1713-1729, 2022 | 19 | 2022 |
| An insight into piscidins: The discovery, modulation and bioactivity of greater amberjack, Seriola dumerili, piscidin DJ Milne, Á Fernández-Montero, MK Gundappa, T Wang, F Acosta, ... Molecular immunology 114, 378-388, 2019 | 19 | 2019 |
| Genome-wide association and genomic prediction of growth traits in the European flat oyster (Ostrea edulis) C Peñaloza, A Barria, A Papadopoulou, C Hooper, J Preston, M Green, ... Frontiers in Genetics, 1751, 2022 | 15 | 2022 |
| SalMotifDB: a tool for analyzing putative transcription factor binding sites in salmonid genomes TD Mulugeta, T Nome, TH To, MK Gundappa, DJ Macqueen, DI Våge, ... BMC genomics 20, 1-8, 2019 | 15 | 2019 |
| A single genomic region involving a putative chromosome rearrangement in flat oyster (Ostrea edulis) is associated with differential host resilience to the parasite Bonamia ostreae IM Sambade, A Casanova, A Blanco, MK Gundappa, TP Bean, ... Evolutionary applications 15 (9), 1408-1422, 2022 | 11 | 2022 |
| Exploration of the nurse shark (Ginglymostoma cirratum) plasma immunoproteome using high-resolution LC-MS/MS FK Bakke, MK Gundappa, H Matz, DA Stead, DJ Macqueen, H Dooley Frontiers in Immunology, 1964, 2022 | 6 | 2022 |
| Empowering bioinformatics communities with Nextflow and nf-core BE Langer, A Amaral, MO Baudement, F Bonath, M Charles, PK Chitneedi, ... bioRxiv, 2024.05. 10.592912, 2024 | 5 | 2024 |
| Conserved and divergent arms of the antiviral response in the duplicated genomes of salmonid fishes TC Clark, S Naseer, MK Gundappa, A Laurent, A Perquis, B Collet, ... Genomics 115 (4), 110663, 2023 | 5 | 2023 |
| Zebrafish as a Model to Unveil the Pro-Osteogenic Effects of Boron-Vitamin D3 Synergism JM Sojan, MK Gundappa, A Carletti, V Gaspar, P Gavaia, F Maradonna, ... Frontiers in Nutrition 9, 868805, 2022 | 4 | 2022 |
| Evolution of ray-finned fish genomes: Status and directions with a primer on microRNA characterization RS Taylor, RR Daniels, DP Morata, MK Gundappa, DJ Macqueen Cellular and Molecular Approaches in Fish Biology, 309-346, 2022 | 4 | 2022 |
| Genomic Epidemiology of Salmonid Alphavirus in Norwegian Aquaculture Reveals Recent Subtype-2 Transmission Dynamics and Novel Subtype-3 Lineages DJ Macqueen, O Eve, MK Gundappa, RR Daniels, MD Gallagher, ... Viruses 13 (12), 2549, 2021 | 4 | 2021 |
| Two parallel chromosome‐level reference genomes to support restoration and aquaculture of European flat oyster Ostrea edulis TP Bean, A Tanguy, C Peñaloza, MK Gundappa, I Boutet, RD Houston, ... Evolutionary Applications 15 (11), 1709-1712, 2022 | 2 | 2022 |
| High performance imputation of structural and single nucleotide variants in Atlantic salmon using low-coverage whole genome sequencing MK Gundappa, D Robledo, A Hamilton, RD Houston, J Prendergast, ... bioRxiv, 2023.03. 05.531147, 2023 | 1 | 2023 |
| A single genomic region involving a putative chromosome rearrangement in flat oyster (Ostrea edulis) is associated with differential host resilience to the parasite Bonamia ostreae P Martínez Portela, I Sambade, A Casanova, A Blanco, M Gundappa, ... A single genomic region involving a putative chromosome rearrangement in …, 2022 | | 2022 |
Dan MacqueenThe Roslin Institute, University of EdinburghVerified email at roslin.ed.ac.uk
