| Improving large language models for clinical named entity recognition via prompt engineering Y Hu, Q Chen, J Du, X Peng, VK Keloth, X Zuo, Y Zhou, Z Li, X Jiang, Z Lu, ... Journal of the American Medical Informatics Association, ocad259, 2024 | 114 | 2024 |
| Conversational bots for psychotherapy: a study of generative transformer models using domain-specific dialogues A Das, S Selek, AR Warner, X Zuo, Y Hu, VK Keloth, J Li, WJ Zheng, H Xu Proceedings of the 21st Workshop on Biomedical Language Processing, 285-297, 2022 | 54 | 2022 |
| Large language models in biomedical natural language processing: benchmarks, baselines, and recommendations Q Chen, J Du, Y Hu, V Kuttichi Keloth, X Peng, K Raja, R Zhang, Z Lu, ... arXiv e-prints, arXiv: 2305.16326, 2023 | 46 | 2023 |
| Me llama: Foundation large language models for medical applications Q Xie, Q Chen, A Chen, C Peng, Y Hu, F Lin, X Peng, J Huang, J Zhang, ... arXiv preprint arXiv:2402.12749, 2024 | 38 | 2024 |
| Advancing entity recognition in biomedicine via instruction tuning of large language models VK Keloth, Y Hu, Q Xie, X Peng, Y Wang, A Zheng, M Selek, K Raja, ... Bioinformatics 40 (4), btae163, 2024 | 32 | 2024 |
| A review of auditing techniques for the Unified Medical Language System L Zheng, Z He, D Wei, V Keloth, JW Fan, L Lindemann, X Zhu, JJ Cimino, ... Journal of the American Medical Informatics Association 27 (10), 1625-1638, 2020 | 16 | 2020 |
| Towards precise PICO extraction from abstracts of randomized controlled trials using a section-specific learning approach Y Hu, VK Keloth, K Raja, Y Chen, H Xu Bioinformatics 39 (9), btad542, 2023 | 14 | 2023 |
| Representing and utilizing clinical textual data for real world studies: An OHDSI approach VK Keloth, JM Banda, M Gurley, PM Heider, G Kennedy, H Liu, F Liu, ... Journal of biomedical informatics 142, 104343, 2023 | 13 | 2023 |
| Leveraging horizontal density differences between ontologies to identify missing child concepts: a proof of concept VK Keloth, Z He, Y Chen, J Geller AMIA Annual Symposium Proceedings 2018, 644, 2018 | 11 | 2018 |
| Mining concepts for a COVID interface terminology for annotation of EHRs VK Keloth, S Zhou, L Lindemann, G Elhanan, AJ Einstein, J Geller, Y Perl 2020 IEEE International Conference on Big Data (Big Data), 3753-3760, 2020 | 10 | 2020 |
| Extended analysis of topological-pattern-based ontology enrichment Z He, VK Keloth, Y Chen, J Geller 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018 | 9 | 2018 |
| How sustainable are biomedical ontologies? J Geller, VK Keloth, MA Musen AMIA Annual Symposium proceedings 2018, 470, 2018 | 9 | 2018 |
| Systematic design and data-driven evaluation of social determinants of health ontology (SDoHO) Y Dang, F Li, X Hu, VK Keloth, M Zhang, S Fu, MF Amith, JW Fan, J Du, ... Journal of the American Medical Informatics Association 30 (9), 1465-1473, 2023 | 8 | 2023 |
| Large language models in biomedical natural language processing: benchmarks, baselines, and recommendations. arXiv Q Chen, J Du, Y Hu, VK Keloth, X Peng, K Raja arXiv preprint arXiv:2305.16326, 2023 | 7 | 2023 |
| Ensemble pretrained language models to extract biomedical knowledge from literature Z Li, Q Wei, LC Huang, J Li, Y Hu, YS Chuang, J He, A Das, VK Keloth, ... Journal of the American Medical Informatics Association, ocae061, 2024 | 6 | 2024 |
| Mining of EHR for interface terminology concepts for annotating EHRs of COVID patients VK Keloth, S Zhou, L Lindemann, L Zheng, G Elhanan, AJ Einstein, ... BMC medical informatics and decision making 23 (Suppl 1), 40, 2023 | 6 | 2023 |
| Visual comprehension and orientation into the COVID-19 CIDO ontology L Zheng, Y Perl, Y He, C Ochs, J Geller, H Liu, VK Keloth Journal of Biomedical Informatics 120, 103861, 2021 | 5 | 2021 |
| Extending import detection algorithms for concept import from two to three biomedical terminologies VK Keloth, J Geller, Y Chen, J Xu BMC medical informatics and decision making 20, 1-11, 2020 | 5 | 2020 |
| Alternative classification of identical concepts in different terminologies: different ways to view the world VK Keloth, Z He, G Elhanan, J Geller Journal of biomedical informatics 94, 103193, 2019 | 5 | 2019 |
| Large language models in biomedical natural language processing: benchmarks, baselines, and recommendations. 2023 Q Chen, J Du, Y Hu, VK Keloth, X Peng, K Raja, R Zhang, X Lu, H Xu arXiv preprint arXiv:2305.16326, 0 | 5 | |
Yan HuUniversity of Texas Health Science Center at HoustonVerified email at uth.tmc.edu