| A proposal of “core enzyme” bioindicator in long-term Pb-Zn ore pollution areas based on topsoil property analysis JS Yang, FL Yang, Y Yang, GL Xing, CP Deng, YT Shen, LQ Luo, BZ Li, ... Environmental Pollution 213, 760-769, 2016 | 132 | 2016 |
| A comprehensive review of the imbalance classification of protein post-translational modifications L Dou, F Yang, L Xu, Q Zou Briefings in Bioinformatics 22 (5), bbab089, 2021 | 37 | 2021 |
| mAML: an automated machine learning pipeline with a microbiome repository for human disease classification F Yang, Q Zou Database 2020, baaa050, 2020 | 32 | 2020 |
| Biodegradation of BTEX aromatics by a haloduric microbial consortium enriched from a sediment of Bohai Sea, China Y Deng, F Yang, C Deng, J Yang, J Jia, H Yuan Applied biochemistry and biotechnology 183, 893-905, 2017 | 24 | 2017 |
| HAlign 3: fast multiple alignment of ultra-large numbers of similar DNA/RNA sequences F Tang, J Chao, Y Wei, F Yang, Y Zhai, L Xu, Q Zou Molecular Biology and Evolution 39 (8), msac166, 2022 | 22 | 2022 |
| GutBalance: a server for the human gut microbiome-based disease prediction and biomarker discovery with compositionality addressed F Yang, Q Zou, B Gao Briefings in Bioinformatics 22 (5), bbaa436, 2021 | 19 | 2021 |
| DisBalance: a platform to automatically build balance-based disease prediction models and discover microbial biomarkers from microbiome data F Yang, Q Zou Briefings in Bioinformatics 22 (5), bbab094, 2021 | 15 | 2021 |
| Resnet for histopathologic cancer detection, the deeper, the better? Z Wang, J Gao, H Kan, Y Huang, F Tang, W Li, F Yang Journal of Data Science and Intelligent Systems 2 (4), 212-220, 2024 | 11 | 2024 |
| Depression-associated gut microbes, metabolites and clinical trials M Wang, Z Song, S Lai, F Tang, L Dou, F Yang Frontiers in Microbiology 15, 1292004, 2024 | 10 | 2024 |
| MMiKG: a knowledge graph-based platform for path mining of microbiota–mental diseases interactions H Sun, Z Song, Q Chen, M Wang, F Tang, L Dou, Q Zou, F Yang Briefings in Bioinformatics 24 (6), bbad340, 2023 | 7 | 2023 |
| WMSA 2: a multiple DNA/RNA sequence alignment tool implemented with accurate progressive mode and a fast win-win mode combining the center star and progressive strategies J Chen, J Chao, H Liu, F Yang, Q Zou, F Tang Briefings in Bioinformatics 24 (4), bbad190, 2023 | 7 | 2023 |
| An improved protocol for extraction of metagenomic DNA from high humus, alkaline and saline soil of Chinampa for T-RFLP fingerprinting analysis. S Embarcadero-Jiménez, YFL Yang FengLong, R Freye-Hernández, ... | 7 | 2014 |
| Bacterial communities and their hydrocarbon bioremediation potential in the Bohai Sea, China F Yang, J Yang, C Deng, N Chen, S Wang, E Wang, HL Yuan Marine Ecology Progress Series 538, 117-130, 2015 | 4 | 2015 |
| Insights into the biodegradation of pentachlorobiphenyl by Microbacterium paraoxydans: proteomic and metabolomic studies L Ji, X Chang, L Wang, X Fu, W Lai, L Zheng, Q Li, Y Xing, Z Yang, ... Frontiers in Microbiology 15, 1389805, 2024 | 1 | 2024 |
| Gut microbial metabolic flux disorder in hypertension W Lai, Y Zhang, M Wang, S Lai, Q Liu, Q Luo, Q Zou, F Yang bioRxiv, 2024.10. 09.617349, 2024 | | 2024 |
| Systematic Mining of gut microbiota biomarkers for IBD Y Zhang, W Lai, M Wang, S Lai, Q Liu, Q Luo, L Dou, F Yang bioRxiv, 2024.10. 10.617522, 2024 | | 2024 |
| Identifying nucleotide-binding leucine-rich repeat receptor and pathogen effector pairing using transfer-learning and bilinear attention network B Qiao, S Wang, M Hou, H Chen, Z Zhou, X Xie, S Pang, C Yang, F Yang, ... Bioinformatics 40 (10), btae581, 2024 | | 2024 |
| The Mechanism Insight into Bacterial Degradation of Pentachlorobiphenyl L Ji, X Chang, L Wang, X Fu, W Lai, L Zheng, Q Li, Y Xing, Z Yang, ... bioRxiv, 2024.01. 18.576235, 2024 | | 2024 |