| Antimicrobial resistance monitoring of water environments: a framework for standardized methods and quality control K Liguori, I Keenum, BC Davis, J Calarco, E Milligan, VJ Harwood, ... Environmental science & technology 56 (13), 9149-9160, 2022 | 190 | 2022 |
| mobileOG-db: a manually curated database of protein families mediating the life cycle of bacterial mobile genetic elements CL Brown, J Mullet, F Hindi, JE Stoll, S Gupta, M Choi, I Keenum, ... Applied and environmental microbiology 88 (18), e00991-22, 2022 | 183 | 2022 |
| Next generation sequencing approaches to evaluate water and wastewater quality E Garner, BC Davis, E Milligan, MF Blair, I Keenum, A Maile-Moskowitz, ... Water Research 194, 116907, 2021 | 100 | 2021 |
| Critical evaluation of short, long, and hybrid assembly for contextual analysis of antibiotic resistance genes in complex environmental metagenomes CL Brown, IM Keenum, D Dai, L Zhang, PJ Vikesland, A Pruden Scientific reports 11 (1), 3753, 2021 | 83 | 2021 |
| A framework for standardized qPCR-targets and protocols for quantifying antibiotic resistance in surface water, recycled water and wastewater I Keenum, K Liguori, J Calarco, BC Davis, E Milligan, VJ Harwood, ... Critical Reviews in Environmental Science and Technology 52 (24), 4395-4419, 2022 | 73 | 2022 |
| Combined effects of composting and antibiotic administration on cattle manure–borne antibiotic resistance genes I Keenum, RK Williams, P Ray, ED Garner, KF Knowlton, A Pruden Microbiome 9, 1-16, 2021 | 57 | 2021 |
| Recommendations for the use of metagenomics for routine monitoring of antibiotic resistance in wastewater and impacted aquatic environments BC Davis, C Brown, S Gupta, J Calarco, K Liguori, E Milligan, VJ Harwood, ... Critical Reviews in Environmental Science and Technology 53 (19), 1731-1756, 2023 | 41 | 2023 |
| Microbiota and antibiotic resistome of lettuce leaves and radishes grown in soils receiving manure-based amendments derived from antibiotic-treated cows K Fogler, GKP Guron, LL Wind, IM Keenum, WC Hession, LA Krometis, ... Frontiers in Sustainable Food Systems 3, 22, 2019 | 34 | 2019 |
| Source-to-tap assessment of microbiological water quality in small rural drinking water systems in Puerto Rico six months after Hurricane Maria I Keenum, MC Medina, E Garner, KJ Pieper, MF Blair, E Milligan, ... Environmental Science & Technology 55 (6), 3775-3785, 2021 | 26 | 2021 |
| A Systematic Review of Culture-Based Methods for Monitoring Antibiotic-Resistant Acinetobacter, Aeromonas, and Pseudomonas as Environmentally Relevant … EG Milligan, J Calarco, BC Davis, IM Keenum, K Liguori, A Pruden, ... Current Environmental Health Reports 10 (2), 154-171, 2023 | 23 | 2023 |
| Structured ethical review for wastewater-based testing in support of public health DA Bowes, A Darling, EM Driver, D Kaya, R Maal-Bared, LM Lee, ... Environmental science & technology 57 (35), 12969-12980, 2023 | 21 | 2023 |
| Towards the standardization of Enterococcus culture methods for waterborne antibiotic resistance monitoring: A critical review of trends across studies BC Davis, I Keenum, J Calarco, K Liguori, E Milligan, A Pruden, ... Water Research X 17, 100161, 2022 | 19 | 2022 |
| Metagenomic tracking of antibiotic resistance genes through a pre‐harvest vegetable production system: an integrated lab‐, microcosm‐and greenhouse‐scale analysis I Keenum, L Wind, P Ray, G Guron, C Chen, K Knowlton, M Ponder, ... Environmental Microbiology 24 (8), 3705-3721, 2022 | 13 | 2022 |
| Integrated metagenomic assessment of multiple pre-harvest control points on lettuce resistomes at field-scale L Wind, I Keenum, S Gupta, P Ray, K Knowlton, M Ponder, WC Hession, ... Frontiers in microbiology 12, 683410, 2021 | 12 | 2021 |
| To what extent do water reuse treatments reduce antibiotic resistance indicators? A comparison of two full-scale systems I Keenum, J Calarco, H Majeed, EE Hager-Soto, C Bott, E Garner, ... Water Research 254, 121425, 2024 | 8 | 2024 |
| Standardizing methods with QA/QC standards for investigating the occurrence and removal of Antibiotic Resistant Bacteria/Antibiotic Resistance Genes (ARB/ARGs) in surface water … K Liguori, I Keenum, B Davis, E Milligan, LS Heath, A Pruden, J Calarco, ... The Water Research Foundation: Denver, CO, USA, 239, 2023 | 8 | 2023 |
| AgroSeek: a system for computational analysis of environmental metagenomic data and associated metadata X Liang, K Akers, I Keenum, L Wind, S Gupta, C Chen, R Aldaihani, ... BMC bioinformatics 22, 1-14, 2021 | 8 | 2021 |
| Comparison of Cefotaxime-Resistant Escherichia coli and sul1 and intI1 by qPCR for Monitoring of Antibiotic Resistance of Wastewater, Surface Water, and … K Liguori, J Calarco, G Maldonado Rivera, A Kurowski, I Keenum, ... Antibiotics 12 (8), 1252, 2023 | 7 | 2023 |
| SALMONELLA, ENTERIC FEVERS, AND SALMONELLOSIS R Hasan, A Nordin, C., S Shakoor, I Keenum, B Vinneras Water and Sanitation for the 21st Century: Health and Microbiological …, 2019 | 7 | 2019 |
| Unveiling the Targeted Opportunities and Universal Challenges of Wastewater-Based Surveillance for Public Health C Mansfeldt, R Maal-Bared, D Kaya, DA Bowes, I Keenum, S Aggarwal, ... ACS ES&T Water 3 (8), 1987-1989, 2023 | 6 | 2023 |
Amy PrudenProfessor of Environmental Engineering, Virginia TechVerified email at vt.edu