| A suite of tutorials for the WESTPA rare-events sampling software [Article v1. 0] AT Bogetti, B Mostofian, A Dickson, AJ Pratt, AS Saglam, PO Harrison, ... Living journal of computational molecular science 1 (2), 2019 | 807 | 2019 |
| Cosolvent pretreatment in cellulosic biofuel production: effect of tetrahydrofuran-water on lignin structure and dynamics MD Smith, B Mostofian, X Cheng, L Petridis, CM Cai, CE Wyman, ... Green Chemistry 18 (5), 1268-1277, 2016 | 141 | 2016 |
| Mechanical properties of nanoscopic lipid domains JD Nickels, X Cheng, B Mostofian, C Stanley, B Lindner, FA Heberle, ... Journal of the American Chemical Society 137 (50), 15772-15780, 2015 | 134 | 2015 |
| Local phase separation of co-solvents enhances pretreatment of biomass for bioenergy applications B Mostofian, CM Cai, MD Smith, L Petridis, X Cheng, CE Wyman, ... Journal of the American Chemical Society 138 (34), 10869-10878, 2016 | 99 | 2016 |
| A multifunctional cosolvent pair reveals molecular principles of biomass deconstruction AS Patri, B Mostofian, Y Pu, N Ciaffone, M Soliman, MD Smith, R Kumar, ... Journal of the American Chemical Society 141 (32), 12545-12557, 2019 | 78 | 2019 |
| Computational Estimation of Microsecond to Second Atomistic Folding Times U Adhikari, B Mostofian, J Copperman, SR Subramanian, A Petersen, ... Journal of the American Chemical Society 141 (16), 6519-6526, 2019 | 66 | 2019 |
| Predicting the structural basis of targeted protein degradation by integrating molecular dynamics simulations with structural mass spectrometry T Dixon, D MacPherson, B Mostofian, T Dauzhenka, S Lotz, D McGee, ... Nature communications 13 (1), 5884, 2022 | 59* | 2022 |
| Bacillus subtilis Lipid Extract, A Branched-Chain Fatty Acid Model Membrane JD Nickels, S Chatterjee, B Mostofian, CB Stanley, M Ohl, P Zolnierczuk, ... The journal of physical chemistry letters 8 (17), 4214-4217, 2017 | 59 | 2017 |
| Simulation of a cellulose fiber in ionic liquid suggests a synergistic approach to dissolution B Mostofian, JC Smith, X Cheng Cellulose 21, 983-997, 2014 | 59 | 2014 |
| High-throughput, single-particle tracking reveals nested membrane domains that dictate KRasG12D diffusion and trafficking Y Lee, C Phelps, T Huang, B Mostofian, L Wu, Y Zhang, K Tao, YH Chang, ... Elife 8, e46393, 2019 | 53 | 2019 |
| Statistical uncertainty analysis for small-sample, high log-variance data: Cautions for bootstrapping and Bayesian bootstrapping B Mostofian, DM Zuckerman Journal of Chemical Theory and Computation 15 (6), 3499-3509, 2019 | 47* | 2019 |
| Branched-chain fatty acid content modulates structure, fluidity, and phase in model microbial cell membranes B Mostofian, T Zhuang, X Cheng, JD Nickels The Journal of Physical Chemistry B 123 (27), 5814-5821, 2019 | 44 | 2019 |
| Interactions between ether phospholipids and cholesterol as determined by scattering and molecular dynamics simulations J Pan, X Cheng, FA Heberle, B Mostofian, N Kučerka, P Drazba, ... The Journal of Physical Chemistry B 116 (51), 14829-14838, 2012 | 44 | 2012 |
| Molecular driving forces behind the tetrahydrofuran–water miscibility gap MD Smith, B Mostofian, L Petridis, X Cheng, JC Smith The Journal of Physical Chemistry B 120 (4), 740-747, 2016 | 43 | 2016 |
| Vascular KATP channel structural dynamics reveal regulatory mechanism by Mg-nucleotides MW Sung, Z Yang, CM Driggers, BL Patton, B Mostofian, JD Russo, ... Proceedings of the National Academy of Sciences 118 (44), e2109441118, 2021 | 42 | 2021 |
| Organosolv-water cosolvent phase separation on cellulose and its influence on the physical deconstruction of cellulose: A molecular dynamics analysis MD Smith, X Cheng, L Petridis, B Mostofian, JC Smith Scientific reports 7 (1), 14494, 2017 | 36 | 2017 |
| Carotenoids promote lateral packing and condensation of lipid membranes B Mostofian, QR Johnson, JC Smith, X Cheng Physical Chemistry Chemical Physics 22 (21), 12281-12293, 2020 | 33 | 2020 |
| Enhanced sampling simulation analysis of the structure of lignin in the THF–water miscibility gap MD Smith, L Petridis, X Cheng, B Mostofian, JC Smith Physical Chemistry Chemical Physics 18 (9), 6394-6398, 2016 | 33 | 2016 |
| Structural relaxation, viscosity, and network connectivity in a hydrogen bonding liquid S Perticaroli, B Mostofian, G Ehlers, JC Neuefeind, SO Diallo, CB Stanley, ... Physical Chemistry Chemical Physics 19 (38), 25859-25869, 2017 | 32 | 2017 |
| Replica-exchange molecular dynamics simulations of cellulose solvated in water and in the ionic liquid 1-butyl-3-methylimidazolium chloride B Mostofian, X Cheng, JC Smith The Journal of Physical Chemistry B 118 (38), 11037-11049, 2014 | 32 | 2014 |
Daniel M. ZuckermanProfessor of Biomedical Engineering. Oregon Health & Science UniversityVerified email at ohsu.edu