| DGIdb 3.0: a redesign and expansion of the drug–gene interaction database KC Cotto, AH Wagner, YY Feng, S Kiwala, AC Coffman, G Spies, ... Nucleic acids research 46 (D1), D1068-D1073, 2018 | 840 | 2018 |
| Integration of the Drug–Gene Interaction Database (DGIdb 4.0) with open crowdsource efforts SL Freshour, S Kiwala, KC Cotto, AC Coffman, JF McMichael, JJ Song, ... Nucleic acids research 49 (D1), D1144-D1151, 2021 | 764 | 2021 |
| CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer M Griffith, NC Spies, K Krysiak, JF McMichael, AC Coffman, AM Danos, ... Nature genetics 49 (2), 170-174, 2017 | 592 | 2017 |
| DGIdb: mining the druggable genome M Griffith, OL Griffith, AC Coffman, JV Weible, JF McMichael, NC Spies, ... Nature methods 10 (12), 1209-1210, 2013 | 542 | 2013 |
| DGIdb 2.0: mining clinically relevant drug–gene interactions AH Wagner, AC Coffman, BJ Ainscough, NC Spies, ZL Skidmore, ... Nucleic acids research 44 (D1), D1036-D1044, 2016 | 404 | 2016 |
| DoCM: a database of curated mutations in cancer BJ Ainscough, M Griffith, AC Coffman, AH Wagner, J Kunisaki, ... Nature methods 13 (10), 806-807, 2016 | 124 | 2016 |
| Genome modeling system: a knowledge management platform for genomics M Griffith, OL Griffith, SM Smith, A Ramu, MB Callaway, AM Brummett, ... PLoS computational biology 11 (7), e1004274, 2015 | 90 | 2015 |
| DGIdb 5.0: rebuilding the drug–gene interaction database for precision medicine and drug discovery platforms M Cannon, J Stevenson, K Stahl, R Basu, A Coffman, S Kiwala, ... Nucleic acids research 52 (D1), D1227-D1235, 2024 | 86 | 2024 |
| Cancer immunogenomics: computational neoantigen identification and vaccine design J Hundal, CA Miller, M Griffith, OL Griffith, J Walker, S Kiwala, A Graubert, ... Cold Spring Harbor symposia on quantitative biology 81, 105-111, 2016 | 29 | 2016 |
| CIViCdb 2022: evolution of an open-access cancer variant interpretation knowledgebase K Krysiak, AM Danos, J Saliba, JF McMichael, AC Coffman, S Kiwala, ... Nucleic acids research 51 (D1), D1230-D1241, 2023 | 18 | 2023 |
| Standard operating procedure for curation and clinical interpretation of variants in cancer AM Danos, K Krysiak, EK Barnell, AC Coffman, JF McMichael, S Kiwala, ... Genome medicine 11, 1-12, 2019 | 17 | 2019 |
| Adapting crowdsourced clinical cancer curation in CIViC to the ClinGen minimum variant level data community‐driven standards AM Danos, DI Ritter, AH Wagner, K Krysiak, D Sonkin, C Micheel, ... Human mutation 39 (11), 1721-1732, 2018 | 14 | 2018 |
| CIViCpy: a python software development and analysis toolkit for the CIViC knowledgebase AH Wagner, S Kiwala, AC Coffman, JF McMichael, KC Cotto, TB Mooney, ... JCO Clinical Cancer Informatics 4, 245-253, 2020 | 12 | 2020 |
| CIViC: a knowledgebase for expert-crowdsourcing the clinical interpretation of variants in cancer M Griffith, NC Spies, K Krysiak, AC Coffman, JF McMichael, BJ Ainscough, ... bioRxiv, 072892, 2016 | 7 | 2016 |
| A community approach to the cancer-variant-interpretation bottleneck K Krysiak, AM Danos, S Kiwala, JF McMichael, AC Coffman, EK Barnell, ... Nature cancer 3 (5), 522-525, 2022 | 5 | 2022 |
| 12. Contextualizing clinical significance using FDA label supplemented DGI data M Cannon, J Stevenson, K Stahl, R Basu, A Coffman, S Kiwala, ... Cancer Genetics 286, S4-S5, 2024 | | 2024 |
| 25. Enhancing precision oncology: The value of open-source knowledgebase integration C Grisdale, E Pleasance, C Frey, C Reisle, L Williamson, J Xu, V Csizmok, ... Cancer Genetics 286, S8, 2024 | | 2024 |
| 28. Addition of non-gene features to the CIViC data model A Danos, K Krysiak, A Coffman, J McMichael, M Khanfar, C Grisdale, ... Cancer Genetics 286, S9, 2024 | | 2024 |
| 54. Creation of a knowledgebase of high-quality assertions of the clinical actionability of somatic variants in cancer J Saliba, A Danos, K Krysiak, A Coffman, S Kiwala, J McMichael, ... Cancer Genetics 286, S17-S18, 2024 | | 2024 |
| P085: Addition of new variant classes to the CIViC data model A Danos, K Krysiak, J Saliba, A Coffman, S Kiwala, J McMichael, ... Genetics in Medicine Open 2, 2024 | | 2024 |
