Individual bat virome analysis reveals co-infection and spillover among bats and virus zoonotic potential J Wang, Y Pan, L Yang, W Yang, K Lv, C Luo, J Wang, G Kuang, W Wu, ... Nature Communications 14 (1), 4079, 2023 | 50 | 2023 |
Rapid evolution of latitudinal clines in growth and defence of an invasive weed Y Yang, M Liu, Y Pan, H Huang, X Pan, A Sosa, Y Hou, Z Zhu, B Li New Phytologist 230 (2), 845-856, 2021 | 33 | 2021 |
Using artificial intelligence to document the hidden RNA virosphere X Hou, Y He, P Fang, SQ Mei, Z Xu, WC Wu, JH Tian, S Zhang, ZY Zeng, ... Cell 187 (24), 6929-6942. e16, 2024 | 24 | 2024 |
Plant invasion alters latitudinal pattern of plant‐defense syndromes M Liu, Y Pan, X Pan, A Sosa, DM Blumenthal, M Van Kleunen, B Li Ecology 102 (12), e03511, 2021 | 16 | 2021 |
Artificial intelligence redefines RNA virus discovery M Shi, X Hou, Y He, P Fang, SQ Mei, Z Xu, WC Wu, J Tian, S Zhang, ... | 14 | 2023 |
Metagenomic analysis of individual mosquito viromes reveals the geographical patterns and drivers of viral diversity YF Pan, H Zhao, QY Gou, PB Shi, JH Tian, Y Feng, K Li, WH Yang, D Wu, ... Nature Ecology & Evolution 8 (5), 947-959, 2024 | 10 | 2024 |
Hierarchical metacommunity structure of fungal endophytes Y Pan, M Liu, A Sosa, B Li, M Shi, X Pan New Phytologist 239 (4), 1464-1474, 2023 | 9 | 2023 |
LucaOne: Generalized Biological Foundation Model with Unified Nucleic Acid and Protein Language Y He, P Fang, Y Shan, Y Pan, Y Wei, Y Chen, Y Chen, Y Liu, Z Zeng, ... bioRxiv, 2024.05. 10.592927, 2024 | 6 | 2024 |
Individual bat viromes reveal the co-infection, spillover and emergence risk of potential zoonotic viruses J Wang, Y Pan, L Yang, W Yang, C Luo, J Wang, G Kuang, W Wu, Q Gou, ... bioRxiv, 2022.11. 23.517609, 2022 | 5 | 2022 |
Metagenomic analysis of individual mosquitos reveals the ecology of insect viruses Y Pan, H Zhao, Q Gou, P Shi, J Tian, Y Feng, K Li, W Yang, D Wu, G Tang, ... bioRxiv, 2023 | 4 | 2023 |
From competition to cooperation: Kin selection against selfish shade avoidance behaviour promotes plant invasions L Chen, Y Pan, X Pan, L Yu, A Sosa, J Yang, B Li Journal of Ecology 111 (3), 645-654, 2023 | 2 | 2023 |
Interactive effect matters: a combination of herbivory degree and the ratio of generalist to specialist better predicts evolution of plant defense Y Pan, X Pan, LDB Faria, B Li bioRxiv, 2022.01. 13.476260, 2022 | 2 | 2022 |
Meta-transcriptomic analysis of companion animal infectomes reveals their diversity and potential roles in animal and human disease WC Wu, YF Pan, WD Zhou, YQ Liao, MW Peng, GY Luo, GY Xin, YN Peng, ... Msphere 9 (8), e00439-24, 2024 | 1 | 2024 |
Plant-soil feedbacks differ between native and introduced populations of Alternanthera philoxeroides S Shen, Y Pan, L Chen, Y Tu, X Pan Biodiversity Science 31 (3), 22436, 2023 | 1 | 2023 |
Infectome analysis of bat kidneys from Yunnan province, China, reveals close relatives of Hendra-Nipah viruses and prevalent bacterial and eukaryotic pathogens G Kuang, T Yang, W Yang, J Wang, H Pan, Y Pan, Q Gou, W Wu, J Wang, ... bioRxiv, 2025.01. 10.632301, 2025 | | 2025 |
Small mammals in a biodiversity hotspot harbor viruses of emergence risk Y Feng, G Kuang, Y Pan, J Wang, W Yang, W Wu, H Pan, J Wang, X Han, ... National Science Review, nwae463, 2024 | | 2024 |
VirID: Beyond Virus Discovery—An Integrated Platform for Comprehensive RNA Virus Characterization Z Yang, Y Shan, X Liu, G Chen, Y Pan, Q Gou, J Zou, Z Chang, Q Zeng, ... Molecular Biology and Evolution 41 (10), msae202, 2024 | | 2024 |
Small mammals in biodiversity hotspot harbor viruses of epidemic potential Y Feng, G Kuang, Y Pan, J Wang, W Yang, W Wu, H Pan, J Wang, X Han, ... bioRxiv, 2024.09. 10.612213, 2024 | | 2024 |
SegFinder: an automated tool for identifying RNA virus genome segments through co-occurrence in multiple sequenced samples X Liu, J Kong, Y Shan, Z Yang, J Miao, Y Pan, T Luo, Z Shi, Y Wang, ... bioRxiv, 2024.08. 19.608591, 2024 | | 2024 |
The specialist-to-generalist ratio affects growth and defense strategy of invasive plant Alternanthera philoxeroides Y Sun, Y Pan, M Liu, X Pan Biodiversity Science 31 (4), 22632, 2023 | | 2023 |