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Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits
L Chen, Q Qiu, YU Jiang, K Wang, Z Lin, Z Li, F Bibi, Y Yang, J Wang, ...
Science 364 (6446), eaav6202, 2019
3712019
Whole-genome resequencing reveals world-wide ancestry and adaptive introgression events of domesticated cattle in East Asia
N Chen, Y Cai, Q Chen, R Li, K Wang, Y Huang, S Hu, S Huang, H Zhang, ...
Nature Communications 9 (1), 2337, 2018
3292018
Comparative analysis of the miRNome of bovine milk fat, whey and cells
R Li, PL Dudemaine, X Zhao, C Lei, EM Ibeagha-Awemu
PloS one 11 (4), e0154129, 2016
1102016
MicroRNA roles in signalling during lactation: an insight from differential expression, time course and pathway analyses of deep sequence data
DN Do, R Li, PL Dudemaine, EM Ibeagha-Awemu
Scientific reports 7 (1), 44605, 2017
1032017
Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
R Li, F Beaudoin, AA Ammah, N Bissonnette, C Benchaar, X Zhao, C Lei, ...
BMC genomics 16, 1-16, 2015
792015
Building a sequence map of the pig pan-genome from multiple de novo assemblies and Hi-C data
X Tian, R Li, W Fu, Y Li, X Wang, M Li, D Du, Q Tang, Y Cai, Y Long, ...
Science China Life Sciences 63, 750-763, 2020
772020
Transcriptome adaptation of the bovine mammary gland to diets rich in unsaturated fatty acids shows greater impact of linseed oil over safflower oil on gene expression and …
EM Ibeagha-Awemu, R Li, AA Ammah, PL Dudemaine, N Bissonnette, ...
BMC genomics 17, 1-23, 2016
672016
A sheep pangenome reveals the spectrum of structural variations and their effects on tail phenotypes
R Li, M Gong, X Zhang, F Wang, Z Liu, L Zhang, Q Yang, Y Xu, M Xu, ...
Genome Research 33 (3), 463-477, 2023
632023
Phylogeography and domestication of Chinese swamp buffalo
XP Yue, R Li, WM Xie, P Xu, TC Chang, L Liu, F Cheng, RF Zhang, ...
PloS one 8 (2), e56552, 2013
602013
Co-expression network and pathway analyses reveal important modules of miRNAs regulating milk yield and component traits
DN Do, PL Dudemaine, R Li, EM Ibeagha-Awemu
International journal of molecular sciences 18 (7), 1560, 2017
552017
An atlas of CNV maps in cattle, goat and sheep
Y Huang, Y Li, X Wang, J Yu, Y Cai, Z Zheng, R Li, S Zhang, N Chen, ...
Science China Life Sciences 64, 1747-1764, 2021
482021
A Hu sheep genome with the first ovine Y chromosome reveal introgression history after sheep domestication
R Li, P Yang, M Li, W Fang, X Yue, HA Nanaei, S Gan, D Du, Y Cai, X Dai, ...
Science China Life Sciences 64, 1116-1130, 2021
452021
Paternal origins of Chinese cattle
R Li, XM Zhang, MG Campana, JP Huang, ZH Chang, XB Qi, H Shi, B Su, ...
Animal genetics 44 (4), 446-449, 2013
452013
Towards the complete goat pan-genome by recovering missing genomic segments from the reference genome
R Li, W Fu, R Su, X Tian, D Du, Y Zhao, Z Zheng, Q Chen, S Gao, Y Cai, ...
Frontiers in genetics 10, 1169, 2019
442019
The developmental transcriptome landscape of bovine skeletal muscle defined by Ribo-Zero ribonucleic acid sequencing
X Sun, M Li, Y Sun, H Cai, R Li, X Wei, X Lan, Y Huang, C Lei, H Chen
Journal of Animal Science 93 (12), 5648-5658, 2015
312015
A near complete genome for goat genetic and genomic research
R Li, P Yang, X Dai, H Asadollahpour Nanaei, W Fang, Z Yang, Y Cai, ...
Genetics Selection Evolution 53, 1-17, 2021
302021
When and how did Bos indicus introgress into Mongolian cattle?
X Yue, R Li, L Liu, Y Zhang, J Huang, Z Chang, R Dang, X Lan, H Chen, ...
Gene 537 (2), 214-219, 2014
292014
Draft genome of the Marco Polo Sheep (Ovis ammon polii)
Y Yang, Y Wang, Y Zhao, X Zhang, R Li, L Chen, G Zhang, Y Jiang, Q Qiu, ...
GigaScience 6 (12), gix106, 2017
252017
Novel Y‐chromosome polymorphisms in C hinese domestic yak
R Li, SQ Wang, SY Xu, JP Huang, FQ Wang, ZJ Ma, RH Dang, XY Lan, ...
Animal Genetics 45 (3), 449-452, 2014
252014
Long divergent haplotypes introgressed from wild sheep are associated with distinct morphological and adaptive characteristics in domestic sheep
H Cheng, Z Zhang, J Wen, JA Lenstra, R Heller, Y Cai, Y Guo, M Li, R Li, ...
PLoS Genetics 19 (2), e1010615, 2023
242023
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