| Comparing the performance of biomedical clustering methods C Wiwie, J Baumbach, R Röttger Nature methods 12 (11), 1033-1038, 2015 | 273 | 2015 |
| Osteogenesis depends on commissioning of a network of stem cell transcription factors that act as repressors of adipogenesis A Rauch, AK Haakonsson, JGS Madsen, M Larsen, I Forss, MR Madsen, ... Nature genetics 51 (4), 716-727, 2019 | 204 | 2019 |
| Quantifying online news media coverage of the COVID-19 pandemic: Text mining study and resource K Krawczyk, T Chelkowski, DJ Laydon, S Mishra, D Xifara, B Gibert, ... Journal of medical Internet research 23 (6), e28253, 2021 | 141 | 2021 |
| CoryneRegNet 6.0—Updated database content, new analysis methods and novel features focusing on community demands J Pauling, R Röttger, A Tauch, V Azevedo, J Baumbach Nucleic acids research 40 (D1), D610-D614, 2012 | 80 | 2012 |
| The AIMe registry for artificial intelligence in biomedical research J Matschinske, N Alcaraz, A Benis, M Golebiewski, DG Grimm, L Heumos, ... Nature methods 18 (10), 1128-1131, 2021 | 54 | 2021 |
| E. coli gene regulatory networks are inconsistent with gene expression data SJ Larsen, R Röttger, HHHW Schmidt, J Baumbach Nucleic acids research 47 (1), 85-92, 2019 | 46 | 2019 |
| An integrative in-silico approach for therapeutic target identification in the human pathogen Corynebacterium diphtheriae SB Jamal, SS Hassan, S Tiwari, MV Viana, LJ Benevides, A Ullah, ... PLoS One 12 (10), e0186401, 2017 | 44 | 2017 |
| NTIRE 2022 challenge on high dynamic range imaging: Methods and results E Pérez-Pellitero, S Catley-Chandar, R Shaw, A Leonardis, R Timofte, ... Proceedings of the IEEE/CVF conference on computer vision and pattern …, 2022 | 40 | 2022 |
| How Little Do We Actually Know?--On the Size of Gene Regulatory Networks. R Rottger, U Ruckert, J Taubert, J Baumbach IEEE/ACM transactions on computational biology and bioinformatics/IEEE, ACM, 2012 | 35 | 2012 |
| Post-hoc vs ante-hoc explanations: xAI design guidelines for data scientists CO Retzlaff, A Angerschmid, A Saranti, D Schneeberger, R Roettger, ... Cognitive Systems Research 86, 101243, 2024 | 31 | 2024 |
| Mature Epitope Density-A strategy for target selection based on immunoinformatics and exported prokaryotic proteins AR Santos, VB Pereira, E Barbosa, J Baumbach, J Pauling, R Röttger, ... BMC genomics 14, 1-11, 2013 | 28 | 2013 |
| All-i-touch as combination of nfc and lifestyle F Kneißl, R Rottger, U Sandner, JM Leimeister, H Krcmar 2009 first international workshop on Near Field Communication, 51-55, 2009 | 27 | 2009 |
| Bi-Force: large-scale bicluster editing and its application to gene expression data biclustering P Sun, NK Speicher, R Röttger, J Guo, J Baumbach Nucleic acids research 42 (9), e78-e78, 2014 | 23 | 2014 |
| In silico identification of essential proteins in Corynebacterium pseudotuberculosis based on protein-protein interaction networks EL Folador, PVSD de Carvalho, WM Silva, RS Ferreira, A Silva, ... BMC Systems Biology 10, 1-9, 2016 | 21 | 2016 |
| Differentially methylated genomic regions in birth‐weight discordant twin pairs M Chen, J Baumbach, F Vandin, R Röttger, E Barbosa, M Dong, M Frost, ... Annals of human genetics 80 (2), 81-87, 2016 | 21 | 2016 |
| The FeatureCloud platform for federated learning in biomedicine: unified approach J Matschinske, J Späth, M Bakhtiari, N Probul, MM Kazemi Majdabadi, ... Journal of Medical Internet Research 25, e42621, 2023 | 20 | 2023 |
| Density parameter estimation for finding clusters of homologous proteins—tracing actinobacterial pathogenicity lifestyles R Röttger, P Kalaghatgi, P Sun, SC Soares, V Azevedo, T Wittkop, ... Bioinformatics 29 (2), 215-222, 2013 | 20 | 2013 |
| Human-in-the-loop integration with domain-knowledge graphs for explainable federated deep learning A Holzinger, A Saranti, AC Hauschild, J Beinecke, D Heider, R Roettger, ... International Cross-Domain Conference for Machine Learning and Knowledge …, 2023 | 19 | 2023 |
| Federated principal component analysis for genome-wide association studies A Hartebrodt, R Nasirigerdeh, DB Blumenthal, R Röttger 2021 IEEE International Conference on Data Mining (ICDM), 1090-1095, 2021 | 19 | 2021 |
| Reversed image signal processing and RAW reconstruction. AIM 2022 challenge report MV Conde, R Timofte, Y Huang, J Peng, C Chen, C Li, E Pérez-Pellitero, ... European Conference on Computer Vision, 3-26, 2022 | 17 | 2022 |