CHARMM‐GUI Membrane Builder toward realistic biological membrane simulations EL Wu, X Cheng, S Jo, H Rui, KC Song, EM Dávila‐Contreras, Y Qi, J Lee, ... Journal of computational chemistry 35 (27), 1997-2004, 2014 | 2297 | 2014 |
Improving the CHARMM force field for polyunsaturated fatty acid chains JB Klauda, V Monje, T Kim, W Im The journal of physical chemistry B 116 (31), 9424-9431, 2012 | 183 | 2012 |
A multiscale coarse-grained model of the SARS-CoV-2 virion A Yu, AJ Pak, P He, V Monje-Galvan, L Casalino, Z Gaieb, AC Dommer, ... Biophysical journal 120 (6), 1097-1104, 2021 | 172 | 2021 |
Developing and testing of lipid force fields with applications to modeling cellular membranes AN Leonard, E Wang, V Monje-Galvan, JB Klauda Chemical reviews 119 (9), 6227-6269, 2019 | 105 | 2019 |
Modeling yeast organelle membranes and how lipid diversity influences bilayer properties V Monje-Galvan, JB Klauda Biochemistry 54 (45), 6852-6861, 2015 | 71 | 2015 |
Influence of cholesterol on phospholipid bilayer structure and dynamics CT Boughter, V Monje-Galvan, W Im, JB Klauda The Journal of Physical Chemistry B 120 (45), 11761-11772, 2016 | 70 | 2016 |
Peripheral membrane proteins: Tying the knot between experiment and computation V Monje-Galvan, JB Klauda Biochimica et Biophysica Acta (BBA)-Biomembranes 1858 (7), 1584-1593, 2016 | 66 | 2016 |
Dual action of hydrotropes at the water/oil interface AA Novikov, AP Semenov, V Monje-Galvan, VN Kuryakov, JB Klauda, ... The Journal of Physical Chemistry C 121 (30), 16423-16431, 2017 | 43 | 2017 |
Binding mechanism of the matrix domain of HIV-1 gag on lipid membranes V Monje-Galvan, GA Voth Elife 9, e58621, 2020 | 35 | 2020 |
Effect of membrane lipid packing on stable binding of the ALPS peptide KD Wildermuth, V Monje-Galvan, LM Warburton, JB Klauda Journal of chemical theory and computation 15 (2), 1418-1429, 2019 | 31 | 2019 |
Protein acylation by saturated very long chain fatty acids and endocytosis are involved in necroptosis AJ Pradhan, D Lu, LR Parisi, S Shen, IA Berhane, SL Galster, K Bynum, ... Cell chemical biology 28 (9), 1298-1309. e7, 2021 | 30 | 2021 |
Preferred binding mechanism of Osh4’s amphipathic lipid-packing sensor motif, insights from molecular dynamics V Monje-Galvan, JB Klauda The Journal of Physical Chemistry B 122 (42), 9713-9723, 2018 | 27 | 2018 |
Molecular interactions of the M and E integral membrane proteins of SARS-CoV-2 V Monje-Galvan, GA Voth Faraday Discussions 232, 49-67, 2021 | 26 | 2021 |
Setting up all-atom molecular dynamics simulations to study the interactions of peripheral membrane proteins with model lipid bilayers V Monje-Galvan, L Warburton, JB Klauda Intracellular Lipid Transport: Methods and Protocols, 325-339, 2019 | 20 | 2019 |
Design of a combined heat, hydrogen, and power plant from university campus waste streams JD Spencer, JM Moton, WT Gibbons, K Gluesenkamp, II Ahmed, ... international journal of hydrogen energy 38 (12), 4889-4900, 2013 | 17 | 2013 |
ST-analyzer: A web-based user interface for simulation trajectory analysis JC Jeong, S Jo, EL Wu, Y Qi, V Monje, MS Yeom, L Gorenstein, F Chen, ... Biophysical Journal 106 (2), 407a, 2014 | 15 | 2014 |
Two sterols, two bilayers: insights on membrane structure from molecular dynamics V Monje-Galvan, JB Klauda Molecular Simulation 43 (13-16), 1179-1188, 2017 | 11 | 2017 |
Effect of Glycone diversity on the interaction of triterpenoid saponins and lipid bilayers J Li, V Monje-Galvan ACS Applied Bio Materials 7 (2), 553-563, 2023 | 9 | 2023 |
Modeling the molecular fingerprint of protein-lipid interactions of MLKL on complex bilayers RX Ramirez, O Campbell, AJ Pradhan, GE Atilla-Gokcumen, ... Frontiers in Chemistry 10, 1088058, 2023 | 9 | 2023 |
Interfacial properties of aqueous solutions of butanol isomers and cyclohexane V Monje-Galvan, JB Klauda Fluid Phase Equilibria 513, 112551, 2020 | 8 | 2020 |