Li (Charlie) Xia

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Fengzhu SunUniversity of Southern CaliforniaVerified email at usc.edu
Jed A. FuhrmanMcCulloch Crosby Chair of Marine Biology, University of Southern CaliforniaVerified email at usc.edu
Jacob CramHorn Point LaboratoryVerified email at umces.edu
Noemi AndorMoffitt Cancer CenterVerified email at moffitt.org
Nancy Ruonan ZhangUniversity of PennsylvaniaVerified email at wharton.upenn.edu
Joshua A. SteeleSr. Scientist (Microbiologist), Southern California Coastal Water Research ProjectVerified email at sccwrp.org
HoJoon LeeStanford UniversityVerified email at stanford.edu
Badri VardarajanAssociate Professor, Neurological SciencesVerified email at columbia.edu
Carlo C. MaleyBiodesign Institute, Arizona State UniversityVerified email at asu.edu
Marnix Jansen, Associate ProfessorUCL Cancer Insititute, University College LondonVerified email at ucl.ac.uk
Trevor A GrahamDirector, Centre for Evolution and Cancer, ICR, LondonVerified email at icr.ac.uk
Athena AktipisPsychology, Arizona State UniversityVerified email at asu.edu
Lindsay A. Farrer, Ph.D.Distinguished Professor of Genetics & Chief Biomedical Genetics, Boston UniversityVerified email at bu.edu
Li-San WangUniversity of PennsylvaniaVerified email at upenn.edu
Gerard D. SchellenbergUniversity of PennsylvaniaVerified email at pennmedicine.upenn.edu
Jeroen RaesProfessor, Faculty of Medicine, Rega Institute, KU Leuven; Group Leader Microbiome, VIB, BelgiumVerified email at med.kuleuven.be
Eric AlmProfessor of Biological Engineering, MITVerified email at mit.edu
Catherine LozuponeAssociate Professor of Medicine, University of Colorado, DenverVerified email at ucdenver.edu
Jonathan FriedmanAssociate Professor, Hebrew University of JerusalemVerified email at mail.huji.ac.il
Will Van TreurenPhD Microbiology and Immunology, Interface BiosciencesVerified email at interface.bio

Li (Charlie) Xia

Other namesLi C. Xia, Li Xia

Department of Statistics and Mathematical Finance

Verified email at scut.edu.cn - Homepage

Bioinformatics Artificial Intelligence Statistical Learning


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Pan-cancer analysis of the extent and consequences of intra-tumor heterogeneity N Andor, T Graham, M Jansen, LC Xia, C Aktipis, C Petritsch, H Ji, ... Nature Medicine 22, 105-113, 2016	834	2016
Correlation detection strategies in microbial data sets vary widely in sensitivity and precision S Weiss, VW Treuren, C Lozupone, K Faust, J Friedman, Y Deng, LC Xia, ... The ISME Journal 10 (7), 1669, 2016	739	2016
Marine bacterial, archaeal and protistan association networks reveal ecological linkages JA Steele, PD Countway, L Xia, PD Vigil, JM Beman, DY Kim, CET Chow, ... The ISME journal 5 (9), 1414-1425, 2011	654	2011
Whole exome sequencing study identifies novel rare and common Alzheimer’s-Associated variants involved in immune response and transcriptional regulation JC Bis, X Jian, BW Kunkle, Y Chen, KL Hamilton-Nelson, WS Bush, ... Molecular psychiatry 25 (8), 1859-1875, 2020	266	2020
Extended local similarity analysis of microbial community and other time series data with replicates LC Xia, JA Steele, JA Cram, ZG Cardon, SL Simmons, JJ Vallino, ... BMC systems biology 5, S15, 2011	251	2011
Identifying Gut Microbiota Associated with Colorectal Cancer Using a Zero-Inflated Lognormal Model D Ai, H Pan, X Li, Y Gao, G Liu, LC Xia Frontiers in Microbiology 10, 826, 2019	175	2019
Efficient statistical significance approximation for local similarity analysis of high-throughput time series data LC Xia, D Ai, J Cram, JA Fuhrman, F Sun Bioinformatics 29 (2), 230-237, 2013	146	2013
Efficient statistical significance approximation for local association analysis of high-throughput time series data LC Xia University of Southern California, 2013	146*	2013
Accurate Genome Relative Abundance Estimation Based on Shotgun Metagenomic Reads LC Xia, JA Cram, T Chen, JA Fuhrman, F Sun PloS ONE 6 (12), e27992, 2011	143	2011
Whole‐exome sequencing in 20,197 persons for rare variants in Alzheimer's disease NS Raghavan, AM Brickman, H Andrews, JJ Manly, N Schupf, R Lantigua, ... Annals of clinical and translational neurology 5 (7), 832-842, 2018	130	2018
Integrated metagenomic data analysis demonstrates that a loss of diversity in oral microbiota is associated with periodontitis D Ai, R Huang, J Wen, C Li, J Zhu, LC Xia* BMC Genomics 18, 1041, 2017	128	2017
Cross-depth analysis of marine bacterial networks suggests downward propagation of temporal changes JA Cram, LC Xia, DM Needham, R Sachdeva, F Sun, JA Fuhrman The ISME journal 9 (12), 2573-2586, 2015	119	2015
Association of Rare Coding Mutations With Alzheimer Disease and Other Dementias Among Adults of European Ancestry FLA Patel D, Mez J, Vardarajan BN, Staley L, Chung J, Zhang X, Farrell JJ ... JAMA Netw Open 2 (3), e191350, 2019	63	2019
Using Decision Tree Aggregation with Random Forest Model to Identify Gut Microbes Associated with Colorectal Cancer D Ai, H Pan, R Han, X Li, G Liu, LC Xia Genes 10 (2), 112, 2019	62	2019
CRISPR–Cas9-targeted fragmentation and selective sequencing enable massively parallel microsatellite analysis GW Shin, SM Grimes, HJ Lee, BT Lau, LC Xia, HP Ji Nature communications 8 (1), 14291, 2017	58	2017
Whole genome sequencing of Caribbean Hispanic families with late‐onset Alzheimer's disease BN Vardarajan, S Barral, J Jaworski, GW Beecham, E Blue, G Tosto, ... Annals of clinical and translational neurology 5 (4), 406-417, 2018	49	2018
Analysis of whole-exome sequencing data for Alzheimer disease stratified by APOE genotype Y Ma, GR Jun, X Zhang, J Chung, AC Naj, Y Chen, C Bellenguez, ... JAMA neurology 76 (9), 1099-1108, 2019	46	2019
A rare missense variant of CASP7 is associated with familial late-onset Alzheimer's disease X Zhang, C Zhu, G Beecham, BN Vardarajan, Y Ma, D Lancour, JJ Farrell, ... Alzheimer's & Dementia 15 (3), 441-452, 2019	45	2019
Identification of large rearrangements in cancer genomes with barcode linked reads LC Xia, JM Bell, C Wood-Bouwens, JJ Chen, NR Zhang, HP Ji Nucleic acids research 46 (4), e19, 2018	43	2018
Quality control and integration of genotypes from two calling pipelines for whole genome sequence data in the Alzheimer's disease sequencing project AC Naj, H Lin, BN Vardarajan, S White, D Lancour, Y Ma, M Schmidt, ... Genomics 111 (4), 808-818, 2019	42	2019

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