| Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci J Lilue, AG Doran, IT Fiddes, M Abrudan, J Armstrong, R Bennett, ... Nature genetics 50 (11), 1574-1583, 2018 | 229 | 2018 |
| Innate resistance against Toxoplasma gondii: an evolutionary tale of mice, cats, and men RT Gazzinelli, R Mendonca-Neto, J Lilue, J Howard, A Sher Cell host & microbe 15 (2), 132-138, 2014 | 156 | 2014 |
| Reciprocal virulence and resistance polymorphism in the relationship between Toxoplasma gondii and the house mouse J Lilue, UB Müller, T Steinfeldt, JC Howard Elife 2, e01298, 2013 | 125 | 2013 |
| Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes D Thybert, M Roller, FCP Navarro, I Fiddes, I Streeter, C Feig, ... Genome research 28 (4), 448-459, 2018 | 101 | 2018 |
| Signatures in SARS-CoV-2 spike protein conferring escape to neutralizing antibodies M Alenquer, F Ferreira, D Lousa, M Valério, M Medina-Lopes, ... PLoS pathogens 17 (8), e1009772, 2021 | 96 | 2021 |
| The Mouse Genomes Project: a repository of inbred laboratory mouse strain genomes DJ Adams, AG Doran, J Lilue, TM Keane Mammalian Genome 26, 403-412, 2015 | 92 | 2015 |
| Variation in olfactory neuron repertoires is genetically controlled and environmentally modulated X Ibarra-Soria, TS Nakahara, J Lilue, Y Jiang, C Trimmer, MAA Souza, ... Elife 6, e21476, 2017 | 80 | 2017 |
| AIM2-like receptors positively and negatively regulate the interferon response induced by cytosolic DNA Y Nakaya, J Lilue, S Stavrou, EA Moran, SR Ross MBio 8 (4), 10.1128/mbio. 00944-17, 2017 | 66 | 2017 |
| Impact of the SnRK1 protein kinase on sucrose homeostasis and the transcriptome during the diel cycle B Peixoto, TA Moraes, V Mengin, L Margalha, R Vicente, R Feil, M Höhne, ... Plant physiology 187 (3), 1357-1373, 2021 | 50 | 2021 |
| Toxoplasma gondii and the Immunity-Related GTPase (IRG) resistance system in mice: a review YO Zhao, C Rohde, JT Lilue, S Könen-Waisman, A Khaminets, JP Hunn, ... Memorias do Instituto Oswaldo Cruz 104, 234-240, 2009 | 49 | 2009 |
| Mouse protein coding diversity: What’s left to discover? J Lilue, A Shivalikanjli, DJ Adams, TM Keane PLoS genetics 15 (11), e1008446, 2019 | 20 | 2019 |
| A hypometabolic defense strategy against malaria S Ramos, TW Ademolue, E Jentho, Q Wu, J Guerra, R Martins, G Pires, ... Cell Metabolism 34 (8), 1183-1200. e12, 2022 | 17 | 2022 |
| Self-renewal of double-negative 3 early thymocytes enables thymus autonomy but compromises the β-selection checkpoint RA Paiva, AGG Sousa, CV Ramos, M Avila, J Lilue, T Paixao, VC Martins Cell reports 35 (2), 2021 | 15 | 2021 |
| Insulin-degrading enzyme (IDE) as a modulator of microglial phenotypes in the context of Alzheimer’s disease and brain aging M Corraliza-Gomez, T Bermejo, J Lilue, N Rodriguez-Iglesias, J Valero, ... Journal of Neuroinflammation 20 (1), 233, 2023 | 10 | 2023 |
| Amino acids 484 and 494 of SARS-CoV-2 spike are hotspots of immune evasion affecting antibody but not ACE2 binding M Alenquer, F Ferreira, D Lousa, M Valério, M Medina-Lopes, ... bioRxiv, 2021.04. 22.441007, 2021 | 7 | 2021 |
| AIM2-like receptors positively and negatively regulate the interferon response induced by cytosolic DNA. mBio 8: e00944-17 Y Nakaya, J Lilue, S Stavrou, EA Moran, SR Ross | 5 | 2017 |
| A HYPOMETABOLIC DEFENSE STRATEGY AGAINST PLASMODIUM INFECTION S Ramos, TW Ademolue, E Jentho, Q Wu, J Guerra, R Martins, G Pires, ... bioRxiv, 2021.09. 08.459402, 2021 | 2 | 2021 |
| Self-renewal capacity of double negative 3 (DN3) early thymocytes preserves thymus autonomous function but compromises the b-selection checkpoint RA Paiva, AGG Sousa, CV Ramos, M Ávila, J Lilue, T Paixão, VC Martins bioRxiv, 2020 | 2 | 2020 |
| The structural diversity of telomeres and centromeres across mouse subspecies revealed by complete assemblies B Francis, L Gozashti, K Costello, T Kasahara, OS Harringmeyer, J Lilue, ... BioRxiv, 2024.10. 24.619615, 2024 | 1 | 2024 |
| Self-renewal of double negative 3 (DN3) early thymocytes allows for thymus autonomy but compromises the β-selection checkpoint RA Paiva, AGG Sousa, CV Ramos, M Ávila, J Lilue, T Paixão, VC Martins bioRxiv, 2020.06. 09.142596, 2020 | 1 | 2020 |