| Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium LJ Ma, HC Van Der Does, KA Borkovich, JJ Coleman, MJ Daboussi, ... Nature 464 (7287), 367-373, 2010 | 1773 | 2010 |
| Natural history and evolutionary principles of gene duplication in fungi I Wapinski, A Pfeffer, N Friedman, A Regev Nature 449 (7158), 54-61, 2007 | 723 | 2007 |
| Proto-genes and de novo gene birth AR Carvunis, T Rolland, I Wapinski, MA Calderwood, MA Yildirim, ... Nature 487 (7407), 370-374, 2012 | 678 | 2012 |
| Construction and analysis of two genome-scale deletion libraries for Bacillus subtilis BM Koo, G Kritikos, JD Farelli, H Todor, K Tong, H Kimsey, I Wapinski, ... Cell systems 4 (3), 291-305. e7, 2017 | 579 | 2017 |
| Comparative functional genomics of the fission yeasts N Rhind, Z Chen, M Yassour, DA Thompson, BJ Haas, N Habib, ... Science 332 (6032), 930-936, 2011 | 550 | 2011 |
| Combination therapies including cilofexor and firsocostat for bridging fibrosis and cirrhosis attributable to NASH R Loomba, M Noureddin, KV Kowdley, A Kohli, A Sheikh, G Neff, ... Hepatology 73 (2), 625-643, 2021 | 234 | 2021 |
| Human-interpretable image features derived from densely mapped cancer pathology slides predict diverse molecular phenotypes JA Diao, JK Wang, WF Chui, V Mountain, SC Gullapally, R Srinivasan, ... Nature communications 12 (1), 1613, 2021 | 197 | 2021 |
| Automatic genome-wide reconstruction of phylogenetic gene trees I Wapinski, A Pfeffer, N Friedman, A Regev Bioinformatics 23 (13), i549-i558, 2007 | 174 | 2007 |
| Support vector machine classification on the web P Pavlidis, I Wapinski, WS Noble Bioinformatics 20 (4), 586-587, 2004 | 174 | 2004 |
| A machine learning approach enables quantitative measurement of liver histology and disease monitoring in NASH A Taylor‐Weiner, H Pokkalla, L Han, C Jia, R Huss, C Chung, H Elliott, ... Hepatology 74 (1), 133-147, 2021 | 167 | 2021 |
| Comparative analysis of mycobacterium and related actinomycetes yields insight into the evolution of mycobacterium tuberculosis pathogenesis AM McGuire, B Weiner, ST Park, I Wapinski, S Raman, G Dolganov, ... BMC genomics 13, 1-27, 2012 | 114 | 2012 |
| Stress-related genomic responses during the course of heat acclimation and its association with ischemic-reperfusion cross-tolerance M Horowitz, L Eli-Berchoer, I Wapinski, N Friedman, E Kodesh Journal of applied physiology 97 (4), 1496-1507, 2004 | 113 | 2004 |
| Evolutionary principles of modular gene regulation in yeasts DA Thompson, S Roy, M Chan, MP Styczynsky, J Pfiffner, C French, ... Elife 2, e00603, 2013 | 95 | 2013 |
| Gene duplication and the evolution of ribosomal protein gene regulation in yeast I Wapinski, J Pfiffner, C French, A Socha, DA Thompson, A Regev Proceedings of the National Academy of Sciences 107 (12), 5505-5510, 2010 | 83 | 2010 |
| Physiological and molecular evidence of heat acclimation memory: a lesson from thermal responses and ischemic cross-tolerance in the heart A Tetievsky, O Cohen, L Eli-Berchoer, G Gerstenblith, MD Stern, ... Physiological genomics 34 (1), 78-87, 2008 | 74 | 2008 |
| Arboretum: reconstruction and analysis of the evolutionary history of condition-specific transcriptional modules S Roy, I Wapinski, J Pfiffner, C French, A Socha, J Konieczka, N Habib, ... Genome Research 23 (6), 1039-1050, 2013 | 63 | 2013 |
| A functional selection model explains evolutionary robustness despite plasticity in regulatory networks N Habib, I Wapinski, H Margalit, A Regev, N Friedman Molecular systems biology 8 (1), 619, 2012 | 61 | 2012 |
| A machine learning approach to liver histological evaluation predicts clinically significant portal hypertension in NASH cirrhosis J Bosch, C Chung, OM Carrasco‐Zevallos, SA Harrison, MF Abdelmalek, ... Hepatology 74 (6), 3146-3160, 2021 | 45 | 2021 |
| Processes and host cells for genome, pathway, and biomolecular engineering JH Konieczka, JE Spoonamore, IN Wapinski, FJ Isaacs, GB Foley | 42 | 2015 |
| Revisiting the Saccharomyces cerevisiae predicted ORFeome QR Li, AR Carvunis, H Yu, JDJ Han, Q Zhong, N Simonis, S Tam, T Hao, ... Genome research 18 (8), 1294-1303, 2008 | 39 | 2008 |
