| Inferring responses to climate dynamics from historical demography in neotropical forest lizards I Prates, AT Xue, JL Brown, DF Alvarado-Serrano, MT Rodrigues, ... Proceedings of the National Academy of Sciences 113 (29), 7978-7985, 2016 | 128 | 2016 |
| Quaternary climate changes as speciation drivers in the Amazon floodplains G Thom, AT Xue, AO Sawakuchi, CC Ribas, MJ Hickerson, A Aleixo, ... Science Advances 6 (11), eaax4718, 2020 | 88 | 2020 |
| Environmental heterogeneity and not vicariant biogeographic barriers generate community‐wide population structure in desert‐adapted snakes EA Myers, AT Xue, M Gehara, CL Cox, AR Davis Rabosky, ... Molecular Ecology 28 (20), 4535-4548, 2019 | 66 | 2019 |
| Long‐term in situ persistence of biodiversity in tropical sky islands revealed by landscape genomics A Mastretta‐Yanes, AT Xue, A Moreno‐Letelier, TH Jorgensen, N Alvarez, ... Molecular Ecology 27 (2), 432-448, 2018 | 55 | 2018 |
| The aggregate site frequency spectrum for comparative population genomic inference AT Xue, MJ Hickerson Molecular Ecology 24 (24), 6223-6240, 2015 | 53 | 2015 |
| Asymmetrical gene flow in five co-distributed syngnathids explained by ocean currents and rafting propensity LD Bertola, JT Boehm, NF Putman, AT Xue, JD Robinson, S Harris, ... Proceedings of the Royal Society B 287 (1926), 20200657, 2020 | 46 | 2020 |
| Pleistocene climatic changes drive diversification across a tropical savanna S Potter, AT Xue, JG Bragg, DF Rosauer, EJ Roycroft, C Moritz Molecular Ecology 27 (2), 520-532, 2018 | 42 | 2018 |
| Urbanization shapes the demographic history of a native rodent (the white-footed mouse, Peromyscus leucopus) in New York City SE Harris, AT Xue, D Alvarado-Serrano, JT Boehm, T Joseph, ... Biology letters 12 (4), 20150983, 2016 | 42 | 2016 |
| Discovery of Ongoing Selective Sweeps within Anopheles Mosquito Populations Using Deep Learning AT Xue, DR Schrider, AD Kern Molecular biology and evolution 38 (3), 1168-1183, 2021 | 36 | 2021 |
| multi‐dice: r package for comparative population genomic inference under hierarchical co‐demographic models of independent single‐population size changes AT Xue, MJ Hickerson Molecular Ecology Resources 17 (6), e212-e224, 2017 | 36 | 2017 |
| Differential effect of selection against LINE retrotransposons among vertebrates inferred from whole-genome data and demographic modeling AT Xue, RP Ruggiero, MJ Hickerson, S Boissinot Genome Biology and Evolution 10 (5), 1265-1281, 2018 | 20 | 2018 |
| Comparative phylogeographic inference with genome-wide data from aggregated population pairs AT Xue, MJ Hickerson Evolution 74 (5), 808-830, 2020 | 12 | 2020 |
| Urbanization shapes the demographic history of a city-dwelling native rodent SE Harris, AT Xue, D Alvarado-Serrano, JT Boehm, T Joseph, ... BioRxiv, 032979, 2015 | 2 | 2015 |
| Inferring polygenic negative selection underlying an individual trait as a distribution of fitness effects (DFEs) from GWAS summary statistics AT Xue, Y Huang, A Siepel bioRxiv, 2024.07. 29.601707, 2024 | | 2024 |
| Comparative Phylogeographic, Population Genomic, and Selection Inference, with Development of Hierarchical Co-Demographic Models AT Xue City University of New York, 2017 | | 2017 |
| Data from: The aggregate site frequency spectrum (aSFS) for comparative population genomic inference AT Xue, MJ Hickerson | | 2015 |
| Discovery of Ongoing Selective Sweeps within Anopheles Mosquito Populations Using Deep Learning http://researchonline. ljmu. ac. uk/id/eprint/18553 AT Xue, DR Schrider, AD Kern, A Della Torre, B Caputo, B Kabula, ... | | |
