| SWAN: Subset-quantile within array normalization for illumina infinium HumanMethylation450 BeadChips J Maksimovic, L Gordon, A Oshlack Genome biology 13, 1-12, 2012 | 917 | 2012 |
| missMethyl: an R package for analyzing data from Illumina’s HumanMethylation450 platform B Phipson, J Maksimovic, A Oshlack Bioinformatics 32 (2), 286-288, 2015 | 719 | 2015 |
| A cross-package Bioconductor workflow for analysing methylation array data J Maksimovic, B Phipson, A Oshlack F1000Research 5 (1281), 2016 | 231 | 2016 |
| Patient-iPSC-derived kidney organoids show functional validation of a ciliopathic renal phenotype and reveal underlying pathogenetic mechanisms TA Forbes, SE Howden, K Lawlor, B Phipson, J Maksimovic, L Hale, ... The American Journal of Human Genetics 102 (5), 816-831, 2018 | 204 | 2018 |
| Differentiation of human embryonic stem cells to HOXA+ hemogenic vasculature that resembles the aorta-gonad-mesonephros ES Ng, L Azzola, FF Bruveris, V Calvanese, B Phipson, K Vlahos, C Hirst, ... Nature biotechnology 34 (11), 1168-1179, 2016 | 204 | 2016 |
| Bacteriophages in gut samples from pediatric Crohn’s disease patients: metagenomic analysis using 454 pyrosequencing J Wagner, J Maksimovic, G Farries, WH Sim, RF Bishop, DJ Cameron, ... Inflammatory bowel diseases 19 (8), 1598-1608, 2013 | 167 | 2013 |
| Genome-wide DNA methylation analysis identifies hypomethylated genes regulated by FOXP3 in human regulatory T cells Y Zhang, J Maksimovic, G Naselli, J Qian, M Chopin, ME Blewitt, ... Blood, The Journal of the American Society of Hematology 122 (16), 2823-2836, 2013 | 138 | 2013 |
| Gestational diabetes and maternal obesity are associated with epigenome-wide methylation changes in children L Hjort, D Martino, LG Grunnet, H Naeem, J Maksimovic, AH Olsson, ... JCI insight 3 (17), 2018 | 122 | 2018 |
| Gene set enrichment analysis for genome-wide DNA methylation data J Maksimovic, A Oshlack, B Phipson Genome Biology 22 (1), 173, 2021 | 111 | 2021 |
| The polycomb repressive complex 2 governs life and death of peripheral T cells Y Zhang, S Kinkel, J Maksimovic, E Bandala-Sanchez, MC Tanzer, ... Blood, The Journal of the American Society of Hematology 124 (5), 737-749, 2014 | 111 | 2014 |
| Condensin I associates with structural and gene regulatory regions in vertebrate chromosomes JH Kim, T Zhang, NC Wong, N Davidson, J Maksimovic, A Oshlack, ... Nature communications 4 (1), 2537, 2013 | 89 | 2013 |
| Removing unwanted variation in a differential methylation analysis of Illumina HumanMethylation450 array data J Maksimovic, JA Gagnon-Bartsch, TP Speed, A Oshlack Nucleic acids research 43 (16), e106-e106, 2015 | 88 | 2015 |
| Epigenome-wide analysis in newborn blood spots from monozygotic twins discordant for cerebral palsy reveals consistent regional differences in DNA methylation N Mohandas, S Bass-Stringer, J Maksimovic, K Crompton, YJ Loke, ... Clinical epigenetics 10, 1-15, 2018 | 64 | 2018 |
| Stability of gene expression and epigenetic profiles highlights the utility of patient-derived paediatric acute lymphoblastic leukaemia xenografts for investigating molecular … NC Wong, VA Bhadri, J Maksimovic, M Parkinson-Bates, J Ng, JM Craig, ... BMC genomics 15, 1-13, 2014 | 37 | 2014 |
| Genome-scale profiling reveals a subset of genes regulated by DNA methylation that program somatic T-cell phenotypes in humans D Martino, J Maksimovic, JHE Joo, SL Prescott, R Saffery Genes & Immunity 13 (5), 388-398, 2012 | 37 | 2012 |
| Direct reprogramming to human nephron progenitor-like cells using inducible piggyBac transposon expression of SNAI2-EYA1-SIX1 JM Vanslambrouck, LE Woodard, N Suhaimi, FM Williams, SE Howden, ... Kidney international 95 (5), 1153-1166, 2019 | 24 | 2019 |
| DNA methylation biomarkers of future health outcomes in children S Shanthikumar, MR Neeland, J Maksimovic, SC Ranganathan, R Saffery Molecular and Cellular Pediatrics 7, 1-11, 2020 | 19 | 2020 |
| Benchmarking single-cell hashtag oligo demultiplexing methods G Howitt, Y Feng, L Tobar, D Vassiliadis, P Hickey, MA Dawson, ... NAR Genomics and Bioinformatics 5 (4), lqad086, 2023 | 17 | 2023 |
| Cord Blood CD8+ T Cells Have a Natural Propensity to Express IL-4 in a Fatty Acid Metabolism and Caspase Activation-Dependent Manner Y Zhang, J Maksimovic, B Huang, DP De Souza, G Naselli, H Chen, ... Frontiers in Immunology 9, 879, 2018 | 16 | 2018 |
| Epigenetic interplay at the β-globin locus WS Lee, B McColl, J Maksimovic, J Vadolas Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1860 (4), 393-404, 2017 | 15 | 2017 |
Alicia OshlackPeter MacCallum Cancer CentreVerified email at petermac.org
