| An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012 | 17405 | 2012 |
| Landscape of transcription in human cells S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ... Nature 489 (7414), 101-108, 2012 | 5803 | 2012 |
| The tomato genome sequence provides insights into fleshy fruit evolution T Tomato Genome Consortium Nature 485 (7400), 635, 2012 | 3383 | 2012 |
| Transcriptome and genome sequencing uncovers functional variation in humans T Lappalainen, M Sammeth, MR Friedländer, PAC ‘t Hoen, J Monlong, ... Nature 501 (7468), 506-511, 2013 | 2133 | 2013 |
| A user's guide to the encyclopedia of DNA elements (ENCODE) ENCODE Project Consortium PLoS Biol 9 (4), e1001046, 2011 | 876 | 2011 |
| Assessment of transcript reconstruction methods for RNA-seq T Steijger, JF Abril, PG Engström, F Kokocinski, TJ Hubbard, R Guigó, ... Nature methods 10 (12), 1177-1184, 2013 | 797 | 2013 |
| A user's guide to the encyclopedia of DNA elements (ENCODE) RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ... PLoS biology 9 (4), 2011 | 685 | 2011 |
| The GEM mapper: fast, accurate and versatile alignment by filtration S Marco-Sola, M Sammeth, R Guigó, P Ribeca Nature methods 9 (12), 1185-1188, 2012 | 672 | 2012 |
| Systematic evaluation of spliced alignment programs for RNA-seq data PG Engström, T Steijger, B Sipos, GR Grant, A Kahles, G Rätsch, ... Nature methods 10 (12), 1185-1191, 2013 | 622 | 2013 |
| Fast computation and applications of genome mappability T Derrien, J Estellé, S Marco Sola, DG Knowles, E Raineri, R Guigó, ... PloS one 7 (1), e30377, 2012 | 586 | 2012 |
| Effect of predicted protein-truncating genetic variants on the human transcriptome MA Rivas, M Pirinen, DF Conrad, M Lek, EK Tsang, KJ Karczewski, ... Science 348 (6235), 666-669, 2015 | 371 | 2015 |
| A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing TS Alioto, I Buchhalter, S Derdak, B Hutter, MD Eldridge, E Hovig, ... Nature communications 6 (1), 1-13, 2015 | 353 | 2015 |
| Modelling and simulating generic RNA-Seq experiments with the flux simulator T Griebel, B Zacher, P Ribeca, E Raineri, V Lacroix, R Guigó, M Sammeth Nucleic acids research 40 (20), 10073-10083, 2012 | 350 | 2012 |
| Reproducibility of high-throughput mRNA and small RNA sequencing across laboratories PAC 't Hoen, MR Friedländer, J Almlöf, M Sammeth, I Pulyakhina, ... Nature biotechnology 31 (11), 1015-1022, 2013 | 276 | 2013 |
| Genome sequence of the olive tree, Olea europaea F Cruz, I Julca, J Gómez-Garrido, D Loska, M Marcet-Houben, E Cano, ... Gigascience 5 (1), 29, 2016 | 226 | 2016 |
| Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx F Abascal, A Corvelo, F Cruz, JL Villanueva-Cañas, A Vlasova, ... Genome biology 17, 1-19, 2016 | 186 | 2016 |
| From useful algorithms for slowly convergent series to physical predictions based on divergent perturbative expansions E Caliceti, M Meyer-Hermann, P Ribeca, A Surzhykov, UD Jentschura Physics reports 446 (1-3), 1-96, 2007 | 150 | 2007 |
| Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence T Alioto, KG Alexiou, A Bardil, F Barteri, R Castanera, F Cruz, A Dhingra, ... The Plant Journal 101 (2), 455-472, 2020 | 130 | 2020 |
| Networks of Ethereum Non-Fungible Tokens: A graph-based analysis of the ERC-721 ecosystem S Casale-Brunet, P Ribeca, P Doyle, M Mattavelli 2021 IEEE International Conference on Blockchain (Blockchain), 188-195, 2021 | 85 | 2021 |
| Evidence for transcript networks composed of chimeric RNAs in human cells S Djebali, J Lagarde, P Kapranov, V Lacroix, C Borel, JM Mudge, ... PLoS One 7 (1), e28213, 2012 | 68 | 2012 |
Roderic GuigoProfessor of Bioinformatics, Center for Genomic Regulation, Universitat Pompeu FabraVerified email at crg.cat