| Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing AM Taxt, E Avershina, SA Frye, U Naseer, R Ahmad Scientific reports 10 (1), 7622, 2020 | 114 | 2020 |
| Distribution of siderophore gene systems on a Vibrionaceae phylogeny: Database searches, phylogenetic analyses and evolutionary perspectives SK Thode, E Rojek, M Kozlowski, R Ahmad, P Haugen PLoS One 13 (2), e0191860, 2018 | 69 | 2018 |
| Ferric uptake regulator protein: Binding free energy calculations and per‐residue free energy decomposition R Ahmad, BO Brandsdal, I Michaud‐Soret, NP Willassen Proteins: Structure, Function, and Bioinformatics 75 (2), 373-386, 2009 | 50 | 2009 |
| AMR-Diag: Neural network based genotype-to-phenotype prediction of resistance towards β-lactams in Escherichia coli and Klebsiella pneumoniae E Avershina, P Sharma, AM Taxt, H Singh, SA Frye, K Paul, A Kapil, ... Computational and Structural Biotechnology Journal 19, 1896-1906, 2021 | 49 | 2021 |
| Structural and computational investigations of VIM-7: Insights into the substrate specificity of VIM metallo-β-lactamases PS Borra, HKS Leiros, R Ahmad, J Spencer, I Leiros, TR Walsh, ... Journal of molecular biology 411 (1), 174-189, 2011 | 47 | 2011 |
| Large expert-curated database for benchmarking document similarity detection in biomedical literature search P Brown, Y Zhou Database 2019, baz085, 2019 | 41 | 2019 |
| Hybrid assembly provides improved resolution of plasmids, antimicrobial resistance genes, and virulence factors in Escherichia coli and Klebsiella pneumoniae clinical isolates A Khezri, E Avershina, R Ahmad Microorganisms 9 (12), 2560, 2021 | 39 | 2021 |
| DNA methylation patterns vary in boar sperm cells with different levels of DNA fragmentation A Khezri, B Narud, EB Stenseth, A Johannisson, FD Myromslien, ... BMC genomics 20, 1-15, 2019 | 39 | 2019 |
| Ultrafast and cost-effective pathogen identification and resistance gene detection in a clinical setting using nanopore flongle sequencing E Avershina, SA Frye, J Ali, AM Taxt, R Ahmad Frontiers in Microbiology 13, 822402, 2022 | 38 | 2022 |
| Vitamin D3 supplementation does not enhance the effects of resistance training in older adults KS Mølmen, D Hammarström, K Pedersen, AC Lian Lie, RB Steile, ... Journal of cachexia, sarcopenia and muscle 12 (3), 599-628, 2021 | 35 | 2021 |
| Clinical Diagnostics of Bacterial Infections and Their Resistance to Antibiotics—Current State and Whole Genome Sequencing Implementation Perspectives E Avershina, A Khezri, R Ahmad Antibiotics 12 (4), 781, 2023 | 31 | 2023 |
| The catalytic domain CysPc of the DEK 1 calpain is functionally conserved in land plants Z Liang, V Demko, RC Wilson, KA Johnson, R Ahmad, PF Perroud, ... The Plant Journal 75 (5), 742-754, 2013 | 31 | 2013 |
| Plasmid identification and plasmid-mediated antimicrobial gene detection in Norwegian isolates A Khezri, E Avershina, R Ahmad Microorganisms 9 (1), 52, 2020 | 30 | 2020 |
| Expression profiling reveals Spot 42 small RNA as a key regulator in the central metabolism of Aliivibrio salmonicida GÅ Hansen, R Ahmad, E Hjerde, CG Fenton, NP Willassen, P Haugen BMC genomics 13, 1-12, 2012 | 29 | 2012 |
| SERS nanowire chip and machine learning-enabled classification of wild-type and antibiotic-resistant bacteria at species and strain levels S Das, K Saxena, JC Tinguely, A Pal, NL Wickramasinghe, A Khezri, ... ACS Applied Materials & Interfaces 15 (20), 24047-24058, 2023 | 28 | 2023 |
| Prediction and experimental testing of ferric uptake regulator regulons in vibrios R Ahmad, E Hjerde, GÅ Hansen, P Haugen, NP Willassen Journal of molecular microbiology and biotechnology 16 (3-4), 159-168, 2009 | 24 | 2009 |
| RiBoSOM: Rapid bacterial genome identification using self-organizing map implemented on the synchoros SiLago platform Y Yang, D Stathis, P Sharma, K Paul, A Hemani, M Grabherr, R Ahmad Proceedings of the 18th International Conference on Embedded Computer …, 2018 | 18 | 2018 |
| VX680 binding in Aurora A: π− π interactions involving the conserved aromatic amino acid of the flexible glycine-rich loop TM Oliveira, R Ahmad, RA Engh The Journal of Physical Chemistry A 115 (16), 3895-3904, 2011 | 17 | 2011 |
| Antimicrobial resistance in a one health and one world perspective—Mechanisms and solutions AL Wester, SØ Solberg, U Gopinathan, R Ahmad, DW Graham Reference Module in Biomedical Sciences, 2024 | 15* | 2024 |
| Highly sensitive quantitative phase microscopy and deep learning aided with whole genome sequencing for rapid detection of infection and antimicrobial resistance A Ahmad, R Hettiarachchi, A Khezri, B Singh Ahluwalia, DN Wadduwage, ... Frontiers in Microbiology 14, 1154620, 2023 | 13 | 2023 |
