Therapeutic target database 2020: enriched resource for facilitating research and early development of targeted therapeutics Y Wang, S Zhang, F Li, Y Zhou, Y Zhang, Z Wang, R Zhang, J Zhu, Y Ren, ... Nucleic acids research 48 (D1), D1031-D1041, 2020 | 863 | 2020 |
Therapeutic target database update 2022: facilitating drug discovery with enriched comparative data of targeted agents Y Zhou, Y Zhang, X Lian, F Li, C Wang, F Zhu, Y Qiu, Y Chen Nucleic acids research 50 (D1), D1398-D1407, 2022 | 513 | 2022 |
NOREVA: enhanced normalization and evaluation of time-course and multi-class metabolomic data Q Yang, Y Wang, Y Zhang, F Li, W Xia, Y Zhou, Y Qiu, H Li, F Zhu Nucleic acids research 48 (W1), W436-W448, 2020 | 185 | 2020 |
Clinical trials, progression-speed differentiating features and swiftness rule of the innovative targets of first-in-class drugs YH Li, XX Li, JJ Hong, YX Wang, JB Fu, H Yang, CY Yu, FC Li, J Hu, ... Briefings in Bioinformatics 21 (2), 649-662, 2020 | 167 | 2020 |
VARIDT 1.0: variability of drug transporter database J Yin, W Sun, F Li, J Hong, X Li, Y Zhou, Y Lu, M Liu, X Zhang, N Chen, ... Nucleic acids research 48 (D1), D1042-D1050, 2020 | 153 | 2020 |
POSREG: proteomic signature discovered by simultaneously optimizing its reproducibility and generalizability F Li, Y Zhou, Y Zhang, J Yin, Y Qiu, J Gao, F Zhu Briefings in Bioinformatics 23 (2), bbac040, 2022 | 109 | 2022 |
How does chirality determine the selective inhibition of histone deacetylase 6? A lesson from trichostatin a enantiomers based on molecular dynamics Y Zhang, JB Ying, JJ Hong, FC Li, TT Fu, FY Yang, GX Zheng, XJ Yao, ... ACS Chemical Neuroscience 10 (5), 2467-2480, 2019 | 92 | 2019 |
INTEDE: interactome of drug-metabolizing enzymes J Yin, F Li, Y Zhou, M Mou, Y Lu, K Chen, J Xue, Y Luo, J Fu, X He, J Gao, ... Nucleic acids research 49 (D1), D1233-D1243, 2021 | 90 | 2021 |
VARIDT 2.0: structural variability of drug transporter T Fu, F Li, Y Zhang, J Yin, W Qiu, X Li, X Liu, W Xin, C Wang, L Yu, J Gao, ... Nucleic Acids Research 50 (D1), D1417-D1431, 2022 | 80 | 2022 |
DrugMAP: molecular atlas and pharma-information of all drugs F Li, J Yin, M Lu, M Mou, Z Li, Z Zeng, Y Tan, S Wang, X Chu, H Dai, ... Nucleic acids research 51 (D1), D1288-D1299, 2023 | 72 | 2023 |
PFmulDL: a novel strategy enabling multi-class and multi-label protein function annotation by integrating diverse deep learning methods W Xia, L Zheng, J Fang, F Li, Y Zhou, Z Zeng, B Zhang, Z Li, H Li, F Zhu Computers in Biology and Medicine 145, 105465, 2022 | 65 | 2022 |
SSizer: determining the sample sufficiency for comparative biological study F Li, Y Zhou, X Zhang, J Tang, Q Yang, Y Zhang, Y Luo, J Hu, W Xue, ... Journal of molecular biology 432 (11), 3411-3421, 2020 | 64 | 2020 |
SYNBIP: synthetic binding proteins for research, diagnosis and therapy X Wang, F Li, W Qiu, B Xu, Y Li, X Lian, H Yu, Z Zhang, J Wang, Z Li, ... Nucleic acids research 50 (D1), D560-D570, 2022 | 62 | 2022 |
Artificial intelligence in pharmaceutical sciences M Lu, J Yin, Q Zhu, G Lin, M Mou, F Liu, Z Pan, N You, X Lian, F Li, ... Engineering 27, 37-69, 2023 | 58 | 2023 |
ConSIG: consistent discovery of molecular signature from OMIC data F Li, J Yin, M Lu, Q Yang, Z Zeng, B Zhang, Z Li, Y Qiu, H Dai, Y Chen, ... Briefings in bioinformatics 23 (4), bbac253, 2022 | 58 | 2022 |
A transformer-based ensemble framework for the prediction of protein–protein interaction sites M Mou, Z Pan, Z Zhou, L Zheng, H Zhang, S Shi, F Li, X Sun, F Zhu Research 6, 0240, 2023 | 56 | 2023 |
RNA–RNA interactions between SARS-CoV-2 and host benefit viral development and evolution during COVID-19 infection S Zhang, K Amahong, C Zhang, F Li, J Gao, Y Qiu, F Zhu Briefings in bioinformatics 23 (1), bbab397, 2022 | 56 | 2022 |
DRESIS: the first comprehensive landscape of drug resistance information X Sun, Y Zhang, H Li, Y Zhou, S Shi, Z Chen, X He, H Zhang, F Li, J Yin, ... Nucleic acids research 51 (D1), D1263-D1275, 2023 | 55 | 2023 |
The binding mode of vilazodone in the human serotonin transporter elucidated by ligand docking and molecular dynamics simulations Y Zhang, G Zheng, T Fu, J Hong, F Li, X Yao, W Xue, F Zhu Physical Chemistry Chemical Physics 22 (9), 5132-5144, 2020 | 44 | 2020 |
Identification of the gene signature reflecting schizophrenia’s etiology by constructing artificial intelligence‐based method of enhanced reproducibility QX Yang, YX Wang, FC Li, S Zhang, YC Luo, Y Li, J Tang, B Li, YZ Chen, ... CNS Neuroscience & Therapeutics 25 (9), 1054-1063, 2019 | 36 | 2019 |