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Shubham Choudhury
Shubham Choudhury
Verified email at iiitd.ac.in
Title
Cited by
Cited by
Year
ToxinPred 3.0: An improved method for predicting the toxicity of peptides
AS Rathore, S Choudhury, A Arora, P Tijare, GPS Raghava
Computers in Biology and Medicine 179, 108926, 2024
522024
CoronaVR: a computational resource and analysis of epitopes and therapeutics for severe acute respiratory syndrome coronavirus-2
AK Gupta, MS Khan, S Choudhury, A Mukhopadhyay, Sakshi, A Rastogi, ...
Frontiers in Microbiology 11, 1858, 2020
262020
An ensemble method for prediction of phage-based therapy against bacterial infections
S Aggarwal, A Dhall, S Patiyal, S Choudhury, A Arora, GPS Raghava
Frontiers in Microbiology 14, 1148579, 2023
212023
AntiBP3: A method for predicting antibacterial peptides against Gram-positive/negative/variable bacteria
N Bajiya, S Choudhury, A Dhall, GPS Raghava
Antibiotics 13 (2), 168, 2024
132024
Computational identification of repurposed drugs against viruses causing epidemics and pandemics via drug-target network analysis
A Rajput, A Thakur, A Rastogi, S Choudhury, M Kumar
Computers in Biology and Medicine 136, 104677, 2021
122021
TNFepitope: A webserver for the prediction of TNF-α inducing epitopes
A Dhall, S Patiyal, S Choudhury, S Jain, K Narang, GPS Raghava
Computers in Biology and Medicine 160, 106929, 2023
102023
Metaviromic analyses of DNA virus community from sediments of the N-Choe stream, North India
A Mukhopadhyay, S Choudhury, M Kumar
Virus Research 330, 199110, 2023
62023
DMPPred: a tool for identification of antigenic regions responsible for inducing type 1 diabetes mellitus
N Kumar, S Patiyal, S Choudhury, R Tomer, A Dhall, GPS Raghava
Briefings in Bioinformatics 24 (1), bbac525, 2023
42023
MRSLpred—a hybrid approach for predicting multi-label subcellular localization of mRNA at the genome scale
S Choudhury, N Bajiya, S Patiyal, GPS Raghava
Frontiers in Bioinformatics 4, 1341479, 2024
32024
Prediction of Anti‐Freezing Proteins From Their Evolutionary Profile
N Kumar, S Choudhury, N Bajiya, S Patiyal, GPS Raghava
Proteomics 25 (3), e202400157, 2025
12025
Prediction of Hemolytic Peptides and their Hemolytic Concentration (HC50)
AS Rathore, N Kumar, S Choudhury, NK Mehta, GPS Raghava
bioRxiv, 2024.07. 23.604887, 2024
12024
Compilation of resources on subcellular localization of lncRNA
S Choudhury, AS Rathore, GPS Raghava
Frontiers in RNA Research 2, 1419979, 2024
12024
Prediction of Plant Resistance Proteins Using Alignment‐Based and Alignment‐Free Approaches
PS Gahlot, S Choudhury, N Bajiya, N Kumar, GPS Raghava
Proteomics, e202400261, 2024
12024
Prediction of hemolytic peptides and their hemolytic concentration
AS Rathore, N Kumar, S Choudhury, NK Mehta, GPS Raghava
Communications Biology 8 (1), 176, 2025
2025
OPEN ACCESS EDITED BY
A Wegrzyn, SG Sanmukh, P Manohar, GPS Raghava, S Aggarwal, ...
Bacteriophage and Host Interactions, 33, 2024
2024
CytoLNCpred-A computational method for predicting cytoplasm associated long-coding RNAs in 15 cell-lines
S Choudhury, NK Mehta, GPS Raghava
bioRxiv, 2024.10. 11.617765, 2024
2024
Genome-based solutions for managing mucormycosis
R Tomer, S Patiyal, D Kaur, S Choudhury, GPS Raghava
Advances in Protein Chemistry and Structural Biology 139, 383-403, 2024
2024
Transcriptomic meta-analysis of Sepsis and other related illness
S Choudhury
Indian Institute of Science Education and Research Kolkata, 2019
2019
Asian Journal of Physics
N Kumar, S Choudhury, NK Singh, H Khatun, A Bera
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Articles 1–19