| A global reference for human genetic variation 1000 Genomes Project Consortium Nature 526 (7571), 68, 2015 | 16303 | 2015 |
| An integrated map of structural variation in 2,504 human genomes PH Sudmant, T Rausch, EJ Gardner, RE Handsaker, A Abyzov, ... Nature 526 (7571), 75-81, 2015 | 2550 | 2015 |
| Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 1809 | 2020 |
| Expanded encyclopaedias of DNA elements in the human and mouse genomes JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ... Nature 583 (7818), 699-710, 2020 | 1512 | 2020 |
| Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder MJ Gandal, P Zhang, E Hadjimichael, RL Walker, C Chen, S Liu, H Won, ... Science 362 (6420), eaat8127, 2018 | 1153 | 2018 |
| Comprehensive functional genomic resource and integrative model for the human brain D Wang, S Liu, J Warrell, H Won, X Shi, FCP Navarro, D Clarke, M Gu, ... Science 362 (6420), eaat8464, 2018 | 929 | 2018 |
| Integrative functional genomic analysis of human brain development and neuropsychiatric risks M Li, G Santpere, YI Kawasawa, OV Evgrafov, FO Gulden, S Pochareddy, ... Science 362 (6420), eaat7615, 2018 | 724 | 2018 |
| Analyses of non-coding somatic drivers in 2,658 cancer whole genomes E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ... Nature 578 (7793), 102-111, 2020 | 583 | 2020 |
| The real cost of sequencing: scaling computation to keep pace with data generation P Muir, S Li, S Lou, D Wang, DJ Spakowicz, L Salichos, J Zhang, ... Genome biology 17, 1-9, 2016 | 524 | 2016 |
| Transcriptome and epigenome landscape of human cortical development modeled in organoids A Amiri, G Coppola, S Scuderi, F Wu, T Roychowdhury, F Liu, ... Science 362 (6420), eaat6720, 2018 | 294 | 2018 |
| Pan-cancer analysis of whole genomes. S Hirano, L Yang, M Juul, CA Purdie, BP O'Neill, R Kabbe, ... Nature 578 (DKFZ-2020-01051), 82-93, 2020 | 278 | 2020 |
| An integrative ENCODE resource for cancer genomics J Zhang, D Lee, V Dhiman, P Jiang, J Xu, P McGillivray, H Yang, J Liu, ... Nature communications 11 (1), 3696, 2020 | 133 | 2020 |
| GC content around splice sites affects splicing through pre-mRNA secondary structures J Zhang, CCJ Kuo, L Chen BMC genomics 12, 1-11, 2011 | 106 | 2011 |
| LARVA: an integrative framework for large-scale analysis of recurrent variants in noncoding annotations L Lochovsky, J Zhang, Y Fu, E Khurana, M Gerstein Nucleic acids research 43 (17), 8123-8134, 2015 | 92 | 2015 |
| Dynamic RNA–protein interactions underlie the zebrafish maternal-to-zygotic transition V Despic, M Dejung, M Gu, J Krishnan, J Zhang, L Herzel, K Straube, ... Genome research 27 (7), 1184-1194, 2017 | 83 | 2017 |
| MicroRNAs establish uniform traits during the architecture of vertebrate embryos DM Kasper, A Moro, E Ristori, A Narayanan, G Hill-Teran, E Fleming, ... Developmental cell 40 (6), 552-565. e5, 2017 | 60 | 2017 |
| Integrated analysis of multimodal single-cell data with structural similarity Y Cao, L Fu, J Wu, Q Peng, Q Nie, J Zhang, X Xie Nucleic acids research 50 (21), e121-e121, 2022 | 59 | 2022 |
| MicroRNA-dependent regulation of biomechanical genes establishes tissue stiffness homeostasis A Moro, TP Driscoll, LC Boraas, W Armero, DM Kasper, N Baeyens, ... Nature cell biology 21 (3), 348-358, 2019 | 59 | 2019 |
| DeepVelo: Single-cell transcriptomic deep velocity field learning with neural ordinary differential equations Z Chen, WC King, A Hwang, M Gerstein, J Zhang Science Advances 8 (48), eabq3745, 2022 | 58 | 2022 |
| STARRPeaker: uniform processing and accurate identification of STARR-seq active regions D Lee, M Shi, J Moran, M Wall, J Zhang, J Liu, D Fitzgerald, Y Kyono, ... Genome biology 21, 1-24, 2020 | 58 | 2020 |
Mark GersteinProfessor of Biomedical Informatics, Yale UniversityVerified email at yale.edu