Nucleosome plasticity is a critical element of chromatin liquid–liquid phase separation and multivalent nucleosome interactions SE Farr, EJ Woods, JA Joseph, A Garaizar, R Collepardo-Guevara Nature communications 12 (1), 2883, 2021 | 127 | 2021 |
OpenMM 8: molecular dynamics simulation with machine learning potentials P Eastman, R Galvelis, RP Peláez, CRA Abreu, SE Farr, E Gallicchio, ... The Journal of Physical Chemistry B 128 (1), 109-116, 2023 | 93 | 2023 |
Emergence of chromatin hierarchical loops from protein disorder and nucleosome asymmetry A Sridhar, SE Farr, G Portella, T Schlick, M Orozco, ... Proceedings of the National Academy of Sciences 117 (13), 7216-7224, 2020 | 39 | 2020 |
DNA binds to a specific site of the adhesive blood-protein von Willebrand factor guided by electrostatic interactions A Sandoval-Pérez, RML Berger, A Garaizar, SE Farr, MA Brehm, G König, ... Nucleic acids research 48 (13), 7333-7344, 2020 | 23 | 2020 |
Nucleosome Spacing Can Fine-Tune Higher Order Chromatin Assembly L Chen, MJ Maristany, SE Farr, J Luo, BA Gibson, LK Doolittle, ... bioRxiv, 2024.12. 23.627571, 2024 | 1 | 2024 |
QuantumBind-RBFE: Accurate Relative Binding Free Energy Calculations Using Neural Network Potentials FS Zariquiey, SE Farr, S Doerr, G De Fabritiis arXiv preprint arXiv:2501.01811, 2025 | | 2025 |
Development of a multiscale coarse-grained chromatin model S Farr | | 2021 |
Research Data Supporting" Emergence of chromatin hierarchical loops from protein disorder and nucleosome asymmetry" A Sridhar, S Farr, G Portella, T Schlick, M Orozco, R Collepardo-Guevera | | 2020 |
Chromatin Structure Regulation by an Epigenetic Switch Tuning the Flexibility of the H1 C-Terminal Domain A Sridhar, S Farr, G Portella, T Schlick, M Orozco, R Collepardo-Guevara Biophysical Journal 116 (3), 70a, 2019 | | 2019 |