| Proteogenomics of non-smoking lung cancer in East Asia delineates molecular signatures of pathogenesis and progression YJ Chen, TI Roumeliotis, YH Chang, CT Chen, CL Han, MH Lin, ... Cell 182 (1), 226-244. e17, 2020 | 278 | 2020 |
| DbPTM 3.0: an informative resource for investigating substrate site specificity and functional association of protein post-translational modifications CT Lu, KY Huang, MG Su, TY Lee, NA Bretana, WC Chang, YJ Chen, ... Nucleic acids research 41 (D1), D295-D305, 2013 | 220 | 2013 |
| K63-polyubiquitinated HAUSP deubiquitinates HIF-1α and dictates H3K56 acetylation promoting hypoxia-induced tumour progression HT Wu, YC Kuo, JJ Hung, CH Huang, WY Chen, TY Chou, Y Chen, ... Nature communications 7 (1), 1-17, 2016 | 124 | 2016 |
| High glucose triggers nucleotide imbalance through O-GlcNAcylation of key enzymes and induces KRAS mutation in pancreatic cells CM Hu, SC Tien, PK Hsieh, YM Jeng, MC Chang, YT Chang, YJ Chen, ... Cell metabolism 29 (6), 1334-1349. e10, 2019 | 107 | 2019 |
| SNOSite: exploiting maximal dependence decomposition to identify cysteine S-nitrosylation with substrate site specificity TY Lee, YJ Chen, TC Lu, HD Huang, YJ Chen PloS one 6 (7), e21849, 2011 | 98 | 2011 |
| dbSNO: a database of cysteine S-nitrosylation TY Lee, YJ Chen, CT Lu, WC Ching, YC Teng, HD Huang, YJ Chen Bioinformatics 28 (17), 2293-2295, 2012 | 90 | 2012 |
| Nitric Oxide Physiological Responses and Delivery Mechanisms Probed by Water-Soluble Roussin’s Red Ester and {Fe(NO)2}10 DNIC YJ Chen, WC Ku, LT Feng, ML Tsai, CH Hsieh, WH Hsu, WF Liaw, ... Journal of the American Chemical Society 130 (33), 10929-10938, 2008 | 85 | 2008 |
| Role of S-Palmitoylation by ZDHHC13 in Mitochondrial function and Metabolism in Liver LF Shen, YJ Chen, KM Liu, ANS Haddad, IW Song, HY Roan, LY Chen, ... Scientific reports 7 (1), 2182, 2017 | 81 | 2017 |
| dbSNO 2.0: a resource for exploring structural environment, functional and disease association and regulatory network of protein S-nitrosylation YJ Chen, CT Lu, MG Su, KY Huang, WC Ching, HH Yang, YC Liao, ... Nucleic acids research 43 (D1), D503-D511, 2015 | 79 | 2015 |
| Identification of Siglec ligands using a proximity labeling method L Chang, YJ Chen, CY Fan, CJ Tang, YH Chen, PY Low, A Ventura, ... Journal of proteome research 16 (10), 3929-3941, 2017 | 78 | 2017 |
| S-Alkylating Labeling Strategy for Site-Specific Identification of the S-Nitrosoproteome YJ Chen, WC Ku, PY Lin, HC Chou, KH Khoo, YJ Chen Journal of proteome research 9 (12), 6417-6439, 2010 | 76 | 2010 |
| dbGSH: a database of S-glutathionylation YJ Chen, CT Lu, TY Lee, YJ Chen Bioinformatics 30 (16), 2386-2388, 2014 | 66 | 2014 |
| RegPhos 2.0: an updated resource to explore protein kinase–substrate phosphorylation networks in mammals KY Huang, HY Wu, YJ Chen, CT Lu, MG Su, YC Hsieh, CM Tsai, KI Lin, ... Database 2014, bau034, 2014 | 63 | 2014 |
| Temporal regulation of Lsp1 O-GlcNAcylation and phosphorylation during apoptosis of activated B cells JL Wu, HY Wu, DY Tsai, MF Chiang, YJ Chen, S Gao, CC Lin, CH Lin, ... Nature communications 7 (1), 12526, 2016 | 42 | 2016 |
| Glycoproteomic alterations in drug-resistant nonsmall cell lung cancer cells revealed by lectin magnetic nanoprobe-based mass spectrometry JT Waniwan, YJ Chen, R Capangpangan, SH Weng, YJ Chen Journal of proteome research 17 (11), 3761-3773, 2018 | 40 | 2018 |
| Palmitoyl acyltransferase, Zdhhc13, facilitates bone mass acquisition by regulating postnatal epiphyseal development and endochondral ossification: a mouse model IW Song, WR Li, LY Chen, LF Shen, KM Liu, JJY Yen, YJ Chen, YJ Chen, ... PLoS One 9 (3), e92194, 2014 | 37 | 2014 |
| GSHSite: exploiting an iteratively statistical method to identify s-glutathionylation sites with substrate specificity YJ Chen, CT Lu, KY Huang, HY Wu, YJ Chen, TY Lee PloS one 10 (4), e0118752, 2015 | 35 | 2015 |
| Mining missing membrane proteins by high-pH reverse-phase StageTip fractionation and multiple reaction monitoring mass spectrometry RB Kitata, BRT Dimayacyac-Esleta, WK Choong, CF Tsai, TD Lin, ... Journal of proteome research 14 (9), 3658-3669, 2015 | 32 | 2015 |
| An intelligent system for identifying acetylated lysine on histones and nonhistone proteins CT Lu, TY Lee, YJ Chen, YJ Chen BioMed research international 2014 (1), 528650, 2014 | 32 | 2014 |
| Molecular basis and role of Siglec-7 ligand expression on chronic lymphocytic leukemia B cells LY Chang, SY Liang, SC Lu, HC Tseng, HY Tsai, CJ Tang, M Sugata, ... Frontiers in Immunology 13, 840388, 2022 | 31 | 2022 |
Yu-Ju ChenInstitute of Chemistry, Academia SinicaVerified email at gate.sinica.edu.tw