Coactivator condensation at super-enhancers links phase separation and gene control BR Sabari, A Dall’Agnese, A Boija, IA Klein, EL Coffey, K Shrinivas, ... Science 361 (6400), eaar3958, 2018 | 2167 | 2018 |
Activation of proto-oncogenes by disruption of chromosome neighborhoods D Hnisz, AS Weintraub, DS Day, AL Valton, RO Bak, CH Li, J Goldmann, ... Science 351 (6280), 1454-1458, 2016 | 1143 | 2016 |
YY1 is a structural regulator of enhancer-promoter loops AS Weintraub, CH Li, AV Zamudio, AA Sigova, NM Hannett, DS Day, ... Cell 171 (7), 1573-1588. e28, 2017 | 959 | 2017 |
An assessment of histone-modification antibody quality TA Egelhofer, A Minoda, S Klugman, K Lee, P Kolasinska-Zwierz, ... Nature structural & molecular biology 18 (1), 91-93, 2011 | 496 | 2011 |
Insulated neighborhoods: structural and functional units of mammalian gene control D Hnisz, DS Day, RA Young Cell 167 (5), 1188-1200, 2016 | 450 | 2016 |
Comparative analysis of metazoan chromatin organization JWK Ho, YL Jung, T Liu, BH Alver, S Lee, K Ikegami, KA Sohn, A Minoda, ... Nature 512 (7515), 449-452, 2014 | 430 | 2014 |
CDK12 loss in cancer cells affects DNA damage response genes through premature cleavage and polyadenylation M Krajewska, R Dries, AV Grassetti, S Dust, Y Gao, H Huang, B Sharma, ... Nature communications 10 (1), 1757, 2019 | 236 | 2019 |
Transcriptional dysregulation of MYC reveals common enhancer-docking mechanism J Schuijers, JC Manteiga, AS Weintraub, DS Day, AV Zamudio, D Hnisz, ... Cell reports 23 (2), 349-360, 2018 | 191 | 2018 |
Interrogating translational efficiency and lineage-specific transcriptomes using ribosome affinity purification P Zhou, Y Zhang, Q Ma, F Gu, DS Day, A He, B Zhou, J Li, SM Stevens, ... Proceedings of the National Academy of Sciences 110 (38), 15395-15400, 2013 | 140 | 2013 |
Comprehensive analysis of promoter-proximal RNA polymerase II pausing across mammalian cell types DS Day, B Zhang, SM Stevens, F Ferrari, EN Larschan, PJ Park, WT Pu Genome biology 17, 1-17, 2016 | 119 | 2016 |
Estimating enrichment of repetitive elements from high-throughput sequence data DS Day, LJ Luquette, PJ Park, PV Kharchenko Genome biology 11, 1-12, 2010 | 118 | 2010 |
BORIS promotes chromatin regulatory interactions in treatment-resistant cancer cells DN Debruyne, R Dries, S Sengupta, D Seruggia, Y Gao, B Sharma, ... Nature 572 (7771), 676-680, 2019 | 109 | 2019 |
A dynamic H3K27ac signature identifies VEGFA-stimulated endothelial enhancers and requires EP300 activity B Zhang, DS Day, JW Ho, L Song, J Cao, D Christodoulou, JG Seidman, ... Genome research 23 (6), 917-927, 2013 | 109 | 2013 |
Cdk1 controls global epigenetic landscape in embryonic stem cells W Michowski, JM Chick, C Chu, A Kolodziejczyk, Y Wang, JM Suski, ... Molecular cell 78 (3), 459-476. e13, 2020 | 104 | 2020 |
VEGF amplifies transcription through ETS1 acetylation to enable angiogenesis J Chen, Y Fu, DS Day, Y Sun, S Wang, X Liang, F Gu, F Zhang, ... Nature communications 8 (1), 383, 2017 | 104 | 2017 |
Amniocytes can serve a dual function as a source of iPS cells and feeder layers RM Anchan, P Quaas, B Gerami-Naini, H Bartake, A Griffin, Y Zhou, ... Human molecular genetics 20 (5), 962-974, 2011 | 85 | 2011 |
A dynamic and integrated epigenetic program at distal regions orchestrates transcriptional responses to VEGFA S Wang, J Chen, SP Garcia, X Liang, F Zhang, P Yan, H Yu, W Wei, Z Li, ... Genome Research 29 (2), 193-207, 2019 | 17 | 2019 |
BRD2 interconnects with BRD3 to facilitate Pol II transcription initiation and elongation to prime promoters for cell differentiation C Wang, Q Xu, X Zhang, DS Day, BJ Abraham, K Lun, L Chen, J Huang, ... Cellular and Molecular Life Sciences 79 (6), 338, 2022 | 14 | 2022 |
Coactivator condensation at super-enhancers links phase separation and gene control. Science BR Sabari, A Dall’Agnese, A Boija, IA Klein, EL Coffey, K Shrinivas, ... | 12 | 2018 |
Targeting transcription in heart failure via CDK7/12/13 inhibition A Hsu, Q Duan, DS Day, X Luo, S McMahon, Y Huang, ZB Feldman, ... Nature Communications 13 (1), 4345, 2022 | 8 | 2022 |