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Edward W Davis II
Edward W Davis II
Senior Bioinformatics Scientist, Oregon State University
Verified email at oregonstate.edu - Homepage
Title
Cited by
Cited by
Year
Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions
JE Loper, KA Hassan, DV Mavrodi, EW Davis, CK Lim, BT Shaffer, ...
PLoS Genet 8 (7), e1002784, 2012
6532012
Sulforaphane bioavailability and chemopreventive activity in men presenting for biopsy of the prostate gland: A randomized controlled trial
Z Zhang, M Garzotto, EW Davis, M Mori, WA Stoller, PE Farris, CP Wong, ...
Nutrition and cancer 72 (1), 74-87, 2020
712020
Unexpected conservation and global transmission of agrobacterial virulence plasmids
AJ Weisberg, EW Davis, J Tabima, MS Belcher, M Miller, CH Kuo, ...
Science 368 (6495), 2020
652020
Characterization of Toxin Complex Gene Clusters and Insect Toxicity of Bacteria Representing Four Subgroups of Pseudomonas fluorescens
LI Rangel, MD Henkels, BT Shaffer, FL Walker, EW Davis II, VO Stockwell, ...
PLoS One 11 (8), e0161120, 2016
572016
Ferric-pyoverdine recognition by Fpv outer membrane proteins of Pseudomonas protegens Pf-5
SL Hartney, S Mazurier, MK Girard, S Mehnaz, EW Davis, H Gross, ...
Journal of bacteriology 195 (4), 765-776, 2013
502013
Analysis of genome sequences from plant pathogenic Rhodococcus reveals genetic novelties in virulence Loci
AL Creason, OM Vandeputte, EA Savory, EW Davis II, ML Putnam, E Hu, ...
PLoS ONE 9 (7), e101996, 2014
492014
Use of whole genome sequences to develop a molecular phylogenetic framework for Rhodococcus fascians and the Rhodococcus genus
AL Creason, EW Davis II, ML Putnam, OM Vandeputte, JH Chang
Frontiers in plant science 5, 2014
412014
The evolution, ecology, and mechanisms of infection by gram-positive, plant-associated bacteria
SP Thapa, EW Davis, Q Lyu, AJ Weisberg, DM Stevens, CR Clarke, ...
Annual review of phytopathology 57, 341-365, 2019
382019
Tropical soils are a reservoir for fluorescent Pseudomonas spp. biodiversity
LD Lopes, EW Davis, MC Pereira e Silva, AJ Weisberg, L Bresciani, ...
Environmental microbiology 20 (1), 62-74, 2018
372018
Gall-ID: tools for genotyping gall-causing phytopathogenic bacteria.
EW Davis II, AJ Weisberg, JF Tabima, NJ Grunwald, JH Chang
PeerJ 4, e2222, 2016
372016
Pseudomonas protegens Pf-5 Causes Discoloration and Pitting of Mushroom Caps Due to the Production of Antifungal Metabolites
MD Henkels, TA Kidarsa, BT Shaffer, NC Goebel, P Burlinson, ...
Molecular Plant-Microbe Interactions 27 (7), 733-746, 2014
342014
Phylogenetic integration reveals the zebrafish core microbiome and its sensitivity to environmental exposures
TJ Sharpton, K Stagaman, MJ Sieler Jr, HK Arnold, EW Davis
Toxics 9 (1), 10, 2021
332021
Ancient co-option of an amino acid ABC transporter locus in Pseudomonas syringae for host signal-dependent virulence gene regulation
Q Yan, CJ Rogan, YY Pang, EW Davis II, JC Anderson
PLoS pathogens 16 (7), e1008680, 2020
332020
Using a lake sediment record to infer the long-term history of cyanobacteria and the recent rise of an anatoxin producing Dolichospermum sp.
WO Hobbs, TW Dreher, EW Davis, RD Vinebrooke, S Wong, T Weissman, ...
Harmful Algae 101, 101971, 2021
262021
Complete genomes derived by directly sequencing freshwater bloom populations emphasize the significance of the genus level ADA clade within the Nostocales
TW Dreher, EW Davis II, RS Mueller
Harmful Algae 103, 102005, 2021
222021
Comparative genomics of the ADA clade within the Nostocales
TW Dreher, EW Davis II, RS Mueller, TG Otten
Harmful Algae 104, 102037, 2021
192021
Genome variations between rhizosphere and bulk soil ecotypes of a Pseudomonas koreensis population
LD Lopes, MC Pereira e Silva, AJ Weisberg, EW Davis, Q Yan, CS Varize, ...
Environmental microbiology 20 (12), 4401-4414, 2018
192018
Interplay between Cruciferous Vegetables and the Gut Microbiome: A Multi-Omic Approach
JA Bouranis, LM Beaver, D Jiang, J Choi, CP Wong, EW Davis, ...
Nutrients 15 (1), 42, 2022
182022
Diversification of the type VI secretion system in agrobacteria
CF Wu, AJ Weisberg, EW Davis, L Chou, S Khan, EM Lai, CH Kuo, ...
Mbio 12 (5), e01927-21, 2021
182021
Metabolism of key atmospheric volatile organic compounds by the marine heterotrophic bacterium Pelagibacter HTCC1062 (SAR11)
ER Moore, AJ Weaver, EW Davis, SJ Giovannoni, KH Halsey
Environmental Microbiology 24 (1), 212-222, 2022
152022
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