| The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text M Krallinger, M Vazquez, F Leitner, D Salgado, A Chatr-Aryamontri, ... BMC bioinformatics 12, 1-31, 2011 | 196 | 2011 |
| The gene normalization task in BioCreative III Z Lu, HY Kao, CH Wei, M Huang, J Liu, CJ Kuo, CN Hsu, RTH Tsai, ... BMC bioinformatics 12, 1-19, 2011 | 174 | 2011 |
| Automatically classifying sentences in full-text biomedical articles into Introduction, Methods, Results and Discussion S Agarwal, H Yu Bioinformatics 25 (23), 3174-3180, 2009 | 125 | 2009 |
| Biomedical negation scope detection with conditional random fields S Agarwal, H Yu Journal of the American medical informatics association 17 (6), 696-701, 2010 | 107 | 2010 |
| BioCreative III interactive task: an overview CN Arighi, PM Roberts, S Agarwal, S Bhattacharya, G Cesareni, ... BMC bioinformatics 12, 1-21, 2011 | 104 | 2011 |
| Detecting hedge cues and their scope in biomedical text with conditional random fields S Agarwal, H Yu Journal of biomedical informatics 43 (6), 953-961, 2010 | 68 | 2010 |
| Automatically classifying the role of citations in biomedical articles S Agarwal, L Choubey, H Yu AMIA Annual Symposium Proceedings 2010, 11, 2010 | 60 | 2010 |
| Are figure legends sufficient? Evaluating the contribution of associated text to biomedical figure comprehension H Yu, S Agarwal, M Johnston, A Cohen Journal of biomedical discovery and collaboration 4, 1-10, 2009 | 44 | 2009 |
| FigSum: automatically generating structured text summaries for figures in biomedical literature S Agarwal, H Yu AMIA Annual Symposium Proceedings 2009, 6, 2009 | 43 | 2009 |
| BioN∅ T: A searchable database of biomedical negated sentences S Agarwal, H Yu, I Kohane BMC bioinformatics 12, 1-7, 2011 | 27 | 2011 |
| Simple and efficient machine learning frameworks for identifying protein-protein interaction relevant articles and experimental methods used to study the interactions S Agarwal, F Liu, H Yu BMC bioinformatics 12, 1-9, 2011 | 22 | 2011 |
| Who’s driving this cloud? towards efficient migration for elastic and autonomic multitenant databases A Elmore, S Das, D Agrawal, A El Abbadi Tecnical Report 5, 2010-05, 2010 | 20 | 2010 |
| Figure summarizer browser extensions for PubMed Central S Agarwal, H Yu Bioinformatics 27 (12), 1723-1724, 2011 | 12 | 2011 |
| Antosiewicz-‐Bourget A Gore, Z Li, HL Fung, JE Young, S Agarwal J., Canto, I., Giorgetti, A., Israel, MA, Kiskinis, E., et al, 63-67, 2011 | 12 | 2011 |
| Silverline: Toward data confidentiality in third-party clouds KPN Puttaswamy, C Kruegel, BY Zhao Technical Report 2010-08, 2010 | 10 | 2010 |
| Investigating and annotating the role of citation in biomedical full-text articles H Yu, S Agarwal, N Frid 2009 IEEE International Conference on Bioinformatics and Biomedicine …, 2009 | 9 | 2009 |
| Beyond captions: Linking figures with abstract sentences in biomedical articles JP Bockhorst, JM Conroy, S Agarwal, DP O’Leary, H Yu PloS One 7 (7), e39618, 2012 | 8 | 2012 |
| Auditory functions in rheumatoid arthritis M Bhama, L Bhama, S Agarwal, NK Soni Indian Journal of Otology 11, 45-48, 2005 | 8 | 2005 |
| An IR-aided machine learning framework for the BioCreative II. 5 Challenge Y Cao, Z Li, F Liu, S Agarwal, Q Zhang, H Yu IEEE/ACM Transactions on Computational Biology and Bioinformatics 7 (3), 454-461, 2010 | 7 | 2010 |
| Machine learning-based approaches for BioCreative-III tasks S Agarwal, F Liu, Z Li, H Yu proceedings of BioCreative-III, Maryland, USA, 42-47, 2010 | 4 | 2010 |
hong yuProfessor, Director, CHORDS; Professor, Miner school of computer & information sciences, UMassVerified email at uml.edu