Salvatore Cosentino

Cited by

	All	Since 2020
Citations	8723	5592
h-index	9	9
i10-index	9	8

1400

700

350

1050

201320142015201620172018201920202021202220232024202560 94 203 409 636 678 982 1236 1308 1082 941 903 122

Public access

View all

11 articles

0 articles

available

not available

Based on funding mandates

Co-authors

Ole LundTechnical University of DenmarkVerified email at dtu.dk
Frank AarestrupTechnical University of Denmark, DTUVerified email at food.dtu.dk
Mette Voldby LarsenVerified email at goseqit.com
Henrik HasmanStatens Serum InstitutVerified email at hasman.dk
Simon RasmussenProfessor, University of CopenhagenVerified email at sund.ku.dk
Ea ZankariVerified email at cbs.dtu.dk
Thomas Sicheritz-PontenProfessor in Computational Phage Biodiscovery, University of CopenhagenVerified email at sund.ku.dk
Dave UsseryProfessor, Department of BioMedical Informatics, UAMSVerified email at uams.edu
Wataru IwasakiProfessor, Department of Integrated Biosciences, the University of TokyoVerified email at k.u-tokyo.ac.jp
Lars JelsbakProfessor at the Technical University of Denmark (DTU Bioengineering)Verified email at bio.dtu.dk
Dhany SaputraPhD student, Center for Biological Sequence Analysis, Technical University of DenmarkVerified email at cbs.dtu.dk
Oksana LukjancenkoClinical Microbiomics A/SVerified email at clinical-microbiomics.com
Christophe DessimozProfessor at UNIL and Director of SIB Swiss Institute of BioinformaticsVerified email at unil.ch
Erik SonnhammerProfessor of Bioinformatics, DBB Stockholm University, Science for Life LaboratoryVerified email at scilifelab.se
Natasha GloverSwiss Institute of Bioinformatics, University of LausanneVerified email at unil.ch
Odile LecompteProfessor of Bioinformatics and Genomics, University of Strasbourg, ICUBEVerified email at unistra.fr
Yannis NeversUniversity of LausanneVerified email at unil.ch
Paul D ThomasProfessor, University of Southern CaliforniaVerified email at usc.edu
Jaime Huerta-CepasGroup Leader at CBGP (UPM-INIA-CSIC), Madrid, SpainVerified email at embl.de
Salvador Capella-GutiérrezBarcelona Supercomputing Centre (BSC)Verified email at bsc.es

Salvatore Cosentino

Research Associate, Graduate School of Frontier Sciences, The University of Tokyo

Verified email at k.u-tokyo.ac.jp - Homepage

Bioinformatics computer science machine learning data analysis


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Identification of acquired antimicrobial resistance genes E Zankari, H Hasman, S Cosentino, M Vestergaard, S Rasmussen, ... Journal of antimicrobial chemotherapy 67 (11), 2640-2644, 2012	5138	2012
Multilocus sequence typing of total-genome-sequenced bacteria MV Larsen, S Cosentino, S Rasmussen, C Friis, H Hasman, RL Marvig, ... Journal of clinical microbiology 50 (4), 1355-1361, 2012	2363	2012
PathogenFinder-distinguishing friend from foe using bacterial whole genome sequence data S Cosentino, M Voldby Larsen, F Møller Aarestrup, O Lund PloS one 8 (10), e77302, 2013	560	2013
Benchmarking of methods for genomic taxonomy MV Larsen, S Cosentino, O Lukjancenko, D Saputra, S Rasmussen, ... Journal of clinical microbiology 52 (5), 1529-1539, 2014	374	2014
SonicParanoid: fast, accurate and easy orthology inference S Cosentino, W Iwasaki Bioinformatics 35 (1), 149-151, 2019	126	2019
The Quest for Orthologs orthology benchmark service in 2022 Y Nevers, TEM Jones, D Jyothi, B Yates, M Ferret, L Portell-Silva, L Codo, ... Nucleic Acids Research 50 (W1), W623-W632, 2022	49	2022
The Quest for Orthologs benchmark service and consensus calls in 2020 AM Altenhoff, J Garrayo-Ventas, S Cosentino, D Emms, NM Glover, ... Nucleic acids research 48 (W1), W538-W545, 2020	49	2020
Ten Years of Collaborative Progress in the Quest for Orthologs T Linard, Benjamin and Ebersberger, Ingo and McGlynn, Shawn E and Glover ... Molecular Biology and Evolution 38 (8), 3033–3045, 2021	36	2021
The CGE tool box MV Larsen, KG Joensen, E Zankari, J Ahrenfeldt, O Lukjancenko, ... Applied Genomics of Foodborne Pathogens, 65-90, 2017	10	2017
SonicParanoid2: fast, accurate, and comprehensive orthology inference with machine learning and language models S Cosentino, S Sriswasdi, W Iwasaki Genome Biology 25 (1), 195, 2024	9	2024
Bacteria can maintain rRNA operons solely on plasmids for hundreds of millions of years M Anda, S Yamanouchi, S Cosentino, M Sakamoto, M Ohkuma, ... Nature Communications 14 (1), 7232, 2023	7	2023
Quest for Orthologs in the Era of Biodiversity Genomics F Langschied, N Bordin, S Cosentino, D Fuentes-Palacios, N Glover, ... Genome biology and evolution 16 (10), evae224, 2024	1	2024
SonicParanoid: extremely fast, accurate, and easy orthology inference S Cosentino, W Iwasaki Bioinformatics. https://doi. org/10.1093/bioinformatics/bty631, 2018	1	2018
New developments for the Quest for Orthologs benchmark service A Altenhoff, Y Nevers, V Tran, D Jyothi, M Martin, S Cosentino, S Majidian, ... NAR genomics and bioinformatics 6 (4), lqae167, 2024		2024
SonicParanoid2: fast, accurate, and comprehensive orthology inference with machine learning and language models S Cosentino, W Iwasaki bioRxiv, 2023.05. 14.540736, 2023		2023
The Good, the Bad and the Deadly: Characterisation of bacteria through DNA analysis S Cosentino, MV Larsen, O Lund Technical University of DenmarkDanmarks Tekniske Universitet, Department of …, 2014		2014

The system can't perform the operation now. Try again later.

Articles 1–16

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Follow

Cited by

Co-authors