Rodrigo Lopez

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Hamish McWilliamRobert Gordon UniversityVerified email at bioinfo-user.org.uk
Weizhong LiZhongshan School of Medicine, Sun Yat-sen UniversityVerified email at mail.sysu.edu.cn
Toby GibsonEMBLVerified email at embl.de
des higginsUniversity College DublinVerified email at ucd.ie
Andreas WilmImmunoScapeVerified email at immunoscape.com
Ramu ChennaComputational BiologistVerified email at embl.de
Nicole RedaschiHead of Software Development, Swiss-Prot group, SIB Swiss Institute of BioinformaticsVerified email at sib.swiss
Iain WallaceCelgeneVerified email at celgene.com
Nigel BrownCEITEC, Masaryk University, Brno, Czech RepublicVerified email at ceitec.muni.cz
Gordon BlackshieldsMMUHVerified email at mater.ie
Maria J. MartinEuropean Bioinformatics InstituteVerified email at ebi.ac.uk
Silvano SquizzatoEuropean Bioinformatics Institute (EMBL-EBI)Verified email at ebi.ac.uk
Fábio MadeiraBioinformatics Project Lead, EMBL-EBIVerified email at ebi.ac.uk
Johannes SödingMax-Planck-Institute for Multidisciplinary Sciences, GöttingenVerified email at mpinat.mpg.de
Kevin KarplusProfessor of Biomolecular Engineering, University of California, Santa CruzVerified email at soe.ucsc.edu
David G DineenPostdoctoral researcher, UC BerkeleyVerified email at ucd.ie
Tamer GurUniversity of KonstanzVerified email at uni-konstanz.de
Paul McGettiganBioinformaticianVerified email at novartis.com
Amos BairochEmeritus professor at the University of Geneva & group leader, SIB Swiss Institute of BioinformaticsVerified email at sib.swiss
Darren A. NataleProtein Information Resource, Georgetown University Medical CenterVerified email at georgetown.edu

Rodrigo Lopez

Head of Web Production. EMBL-EBI (Retired August 2022)

Verified email at ebi.ac.uk - Homepage

bioinformatics computational biology


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Clustal W and Clustal X version 2.0 MA Larkin, G Blackshields, NP Brown, R Chenna, PA McGettigan, ... bioinformatics 23 (21), 2947-2948, 2007	33198	2007
Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega F Sievers, A Wilm, D Dineen, TJ Gibson, K Karplus, W Li, R Lopez, ... Molecular systems biology 7 (1), 539, 2011	16617	2011
UniProt: the universal protein knowledgebase in 2021 Nucleic acids research 49 (D1), D480-D489, 2021	9435*	2021
InterProScan 5: genome-scale protein function classification P Jones, D Binns, HY Chang, M Fraser, W Li, C McAnulla, H McWilliam, ... Bioinformatics 30 (9), 1236-1240, 2014	7742	2014
UniProt: a worldwide hub of protein knowledge UniProt Consortium Nucleic acids research 47 (D1), D506-D515, 2019	7008	2019
Multiple sequence alignment with the Clustal series of programs R Chenna, H Sugawara, T Koike, R Lopez, TJ Gibson, DG Higgins, ... Nucleic acids research 31 (13), 3497-3500, 2003	6037	2003
UniProt: the universal protein knowledgebase R Apweiler, A Bairoch, CH Wu, WC Barker, B Boeckmann, S Ferro, ... Nucleic acids research 32 (suppl_1), D115-D119, 2004	5587*	2004
The EMBL-EBI search and sequence analysis tools APIs in 2019 F Madeira, YM Park, J Lee, N Buso, T Gur, N Madhusoodanan, ... Nucleic acids research 47 (W1), W636-W641, 2019	4576	2019
InterProScan: protein domains identifier E Quevillon, V Silventoinen, S Pillai, N Harte, N Mulder, R Apweiler, ... Nucleic acids research 33 (suppl_2), W116-W120, 2005	3171	2005
The universal protein resource (UniProt) UniProt Consortium Nucleic acids research 36 (suppl_1), D190-D195, 2007	3051*	2007
The universal protein resource (UniProt) A Bairoch, R Apweiler, CH Wu, WC Barker, B Boeckmann, S Ferro, ... Nucleic acids research 33 (suppl_1), D154-D159, 2005	2305	2005
A new bioinformatics analysis tools framework at EMBL–EBI M Goujon, H McWilliam, W Li, F Valentin, S Squizzato, J Paern, R Lopez Nucleic acids research 38 (suppl_2), W695-W699, 2010	2299	2010
InterPro: the integrative protein signature database S Hunter, R Apweiler, TK Attwood, A Bairoch, A Bateman, D Binns, P Bork, ... Nucleic acids research 37 (suppl_1), D211-D215, 2009	2290	2009
Analysis tool web services from the EMBL-EBI H McWilliam, W Li, M Uludag, S Squizzato, YM Park, N Buso, AP Cowley, ... Nucleic acids research 41 (W1), W597-W600, 2013	2113	2013
Search and sequence analysis tools services from EMBL-EBI in 2022 F Madeira, M Pearce, ARN Tivey, P Basutkar, J Lee, O Edbali, ... Nucleic acids research 50 (W1), W276-W279, 2022	2042	2022
HMMER web server: 2018 update SC Potter, A Luciani, SR Eddy, Y Park, R Lopez, RD Finn Nucleic acids research 46 (W1), W200-W204, 2018	1889	2018
InterPro in 2017—beyond protein family and domain annotations RD Finn, TK Attwood, PC Babbitt, A Bateman, P Bork, AJ Bridge, ... Nucleic acids research 45 (D1), D190-D199, 2017	1611	2017
InterPro in 2019: improving coverage, classification and access to protein sequence annotations AL Mitchell, TK Attwood, PC Babbitt, M Blum, P Bork, A Bridge, SD Brown, ... Nucleic acids research 47 (D1), D351-D360, 2019	1567	2019
The InterPro protein families database: the classification resource after 15 years A Mitchell, HY Chang, L Daugherty, M Fraser, S Hunter, R Lopez, ... Nucleic acids research 43 (D1), D213-D221, 2015	1443	2015
Activities at the universal protein resource (UniProt) UniProt Consortium Nucleic acids research 42 (D1), D191-D198, 2014	1406	2014

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