| RDP4: Detection and analysis of recombination patterns in virus genomes DP Martin, B Murrell, M Golden, A Khoosal, B Muhire Virus evolution 1 (1), vev003, 2015 | 3122 | 2015 |
| SDT: a virus classification tool based on pairwise sequence alignment and identity calculation BM Muhire, A Varsani, DP Martin PloS one 9 (9), e108277, 2014 | 1671 | 2014 |
| A genome-wide pairwise-identity-based proposal for the classification of viruses in the genus Mastrevirus (family Geminiviridae) B Muhire, DP Martin, JK Brown, J Navas-Castillo, E Moriones, FM Zerbini, ... Archives of virology 158, 1411-1424, 2013 | 363 | 2013 |
| RDP4: detection and analysis of recombination patterns in virus genomes. Virus Evol 1: vev003 DP Martin, B Murrell, M Golden, A Khoosal, B Muhire | 333 | 2015 |
| Methionine metabolism shapes T helper cell responses through regulation of epigenetic reprogramming DG Roy, J Chen, V Mamane, EH Ma, BM Muhire, RD Sheldon, ... Cell metabolism 31 (2), 250-266. e9, 2020 | 263 | 2020 |
| Detecting and analyzing genetic recombination using RDP4 DP Martin, B Murrell, A Khoosal, B Muhire Bioinformatics: Volume I: data, sequence analysis, and evolution, 433-460, 2017 | 134 | 2017 |
| Appearances can be deceptive: revealing a hidden viral infection with deep sequencing in a plant quarantine context T Candresse, D Filloux, B Muhire, C Julian, S Galzi, G Fort, P Bernardo, ... PLoS One 9 (7), e102945, 2014 | 113 | 2014 |
| Pervasive tertiary structure in the dengue virus RNA genome EA Dethoff, MA Boerneke, NS Gokhale, BM Muhire, DP Martin, MT Sacco, ... Proceedings of the National Academy of Sciences 115 (45), 11513-11518, 2018 | 104 | 2018 |
| Extensive recombination detected among beak and feather disease virus isolates from breeding facilities in Poland L Julian, T Piasecki, K Chrząstek, M Walters, B Muhire, GW Harkins, ... Journal of General virology 94 (5), 1086-1095, 2013 | 91 | 2013 |
| RDP4: Detection and analysis of recombination patterns in virus genomes. Virus Evol 1: 1–5 DP Martin, B Murrell, M Golden, A Khoosal, B Muhire | 88 | 2015 |
| The global distribution of Banana bunchy top virus reveals little evidence for frequent recent, human-mediated long distance dispersal events D Stainton, DP Martin, BM Muhire, S Lolohea, M Halafihi, P Lepoint, ... Virus evolution 1 (1), vev009, 2015 | 84 | 2015 |
| Evidence of pervasive biologically functional secondary structures within the genomes of eukaryotic single-stranded DNA viruses BM Muhire, M Golden, B Murrell, P Lefeuvre, JM Lett, A Gray, AYF Poon, ... Journal of virology 88 (4), 1972-1989, 2014 | 49 | 2014 |
| Pigeon circoviruses display patterns of recombination, genomic secondary structure and selection similar to those of beak and feather disease viruses T Stenzel, T Piasecki, K Chrząstek, L Julian, BM Muhire, M Golden, ... Journal of General Virology 95 (6), 1338-1351, 2014 | 48 | 2014 |
| Molecular characterization and prevalence of two capulaviruses: Alfalfa leaf curl virus from France and Euphorbia caput-medusae latent virus from South Africa P Bernardo, B Muhire, S François, M Deshoux, P Hartnady, S Kraberger, ... Virology 493, 142-153, 2016 | 43 | 2016 |
| Molecular diversity of Chickpea chlorotic dwarf virus in Sudan: High rates of intra-species recombination–a driving force in the emergence of new strains S Kraberger, SG Kumari, AA Hamed, B Gronenborn, JE Thomas, ... Infection, Genetics and Evolution 29, 203-215, 2015 | 33 | 2015 |
| Chromatin restriction by the nucleosome remodeler Mi-2β and functional interplay with lineage-specific transcription regulators control B-cell differentiation T Yoshida, Y Hu, Z Zhang, AO Emmanuel, K Galani, B Muhire, ... Genes & Development 33 (13-14), 763-781, 2019 | 31 | 2019 |
| Recombinant goose circoviruses circulating in domesticated and wild geese in Poland T Stenzel, D Dziewulska, BM Muhire, P Hartnady, S Kraberger, DP Martin, ... Viruses 10 (3), 107, 2018 | 25 | 2018 |
| Excess dietary carbohydrate affects mitochondrial integrity as observed in brown adipose tissue AN Waldhart, B Muhire, B Johnson, D Pettinga, ZB Madaj, E Wolfrum, ... Cell reports 36 (5), 2021 | 22 | 2021 |
| Non-neutral evolution of H3. 3-encoding genes occurs without alterations in protein sequence BM Muhire, MA Booker, MY Tolstorukov Scientific Reports 9 (1), 8472, 2019 | 22 | 2019 |
| Extensive recombination-induced disruption of genetic interactions is highly deleterious but can be partially reversed by small numbers of secondary recombination events AL Monjane, DP Martin, F Lakay, BM Muhire, D Pande, A Varsani, ... Journal of virology 88 (14), 7843-7851, 2014 | 21 | 2014 |
Darren MartinUniversity of Cape TownVerified email at uct.ac.za